Phocoena sinus (vaquita): 116762180
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Entry
116762180 CDS
T07759
Name
(RefSeq) MHC class I polypeptide-related sequence B-like
KO
K07985
MHC class I-related protein
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04650
Natural killer cell mediated cytotoxicity
psiu05167
Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09151 Immune system
04650 Natural killer cell mediated cytotoxicity
116762180
09160 Human Diseases
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
116762180
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Gene cluster
GFIT
Motif
Pfam:
MHC_I
Motif
Other DBs
NCBI-GeneID:
116762180
NCBI-ProteinID:
XP_032504819
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All DBs
Position
11:80794224..80805069
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AA seq
318 aa
AA seq
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MRADRGVFIFSSGSLRTRNLNAALSPPSLHISSFILLLNPWTTFISFSPGFGGRVISSPH
CKLWPSRENFRAFLRAPPWVLRASALGGLGSFSGPSSGTRGLQKERCRCAGESRGTKDHT
VFYNLTALTRDGSVQSSFFAGGHLDGQALLHYDRETSRVEPRGLWAEELGAETWDTESKD
LTETWKDLRELLAEILALQEEKGGVNSLQEIWAVKSEKTTTPGASGFATMMGSSSSPVTQ
RPTTAPQSLAQNLAVEMEKSWDTDGFQSKYYQAHVQGELCGRLRGYLESWTGFRERTDLS
HCCWVPTGNRKQPARMLP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcggacaggggagtcttcattttctcaagcggcagtttgagaaccagaaaccta
aatgcagctctctcccctcccagcctgcacataagttcctttattctgcttttaaatccg
tggacgacttttatttccttcagcccagggtttgggggacgggtgatttccagtcctcac
tgtaaactctggcccagcagagaaaacttcagggccttcctgcgagccccgccttgggtt
ctgcgagcatccgcgctgggtggtttaggttccttttccggacccagcagtggcaccaga
ggtctgcagaaagaaagatgccgctgtgcgggtgagtccaggggtacaaaggatcacaca
gtcttctacaacctcacggcgctgacccgggatggatctgtgcagtccagctttttcgct
gggggacacttggatggccaggccctcctgcactatgaccgtgagacaagcagggtagaa
ccccgggggctgtgggcagaagagctgggagctgagacgtgggacacagagtccaaggac
ttgacagagacgtggaaggacctcagagagcttctagcagaaatcctggccctgcaggag
gagaaaggaggtgtgaattccctccaggagatctgggctgtgaaatccgagaagacaacc
acgcctggagcttcaggtttcgctactatgatggggagctcctcctctcctgtcacccag
agacccactacagcgccccagtccttggctcagaacctggccgtggaaatggagaagtcc
tgggacacagatggctttcaaagcaagtattaccaggcccacgtgcagggagagctttgt
ggaagactgcggggctatctggaatcctggacaggcttcagggagagaacagacctctcg
cactgctgctgggtcccgacaggaaaccgaaagcagccagcgcggatgcttccataa
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