Phocoena sinus (vaquita): 116762532
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Entry
116762532 CDS
T07759
Symbol
DYNC1LI1
Name
(RefSeq) cytoplasmic dynein 1 light intermediate chain 1 isoform X1
KO
K10416
dynein cytoplasmic 1 light intermediate chain
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04145
Phagosome
psiu04814
Motor proteins
psiu04962
Vasopressin-regulated water reabsorption
psiu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116762532 (DYNC1LI1)
09142 Cell motility
04814 Motor proteins
116762532 (DYNC1LI1)
09150 Organismal Systems
09155 Excretory system
04962 Vasopressin-regulated water reabsorption
116762532 (DYNC1LI1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116762532 (DYNC1LI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116762532 (DYNC1LI1)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116762532 (DYNC1LI1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psiu04812
]
116762532 (DYNC1LI1)
Membrane trafficking [BR:
psiu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
116762532 (DYNC1LI1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
116762532 (DYNC1LI1)
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
116762532 (DYNC1LI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DLIC
ABC_tran
Roc
RsgA_GTPase
AAA_16
PduV-EutP
DUF815
TsaE
AAA_7
Motif
Other DBs
NCBI-GeneID:
116762532
NCBI-ProteinID:
XP_032505488
Ensembl:
ENSPSNG00000009811
LinkDB
All DBs
Position
11:52096600..52140703
Genome browser
AA seq
524 aa
AA seq
DB search
MAAVGRVGSFGSSTAGLTSTYTGGPLANELTSGNGGAAAGDDEDGQNLWSCILSEVSTRS
RSKLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVW
ILDGDPYHKGLLKFSLDAISLKDTLVTLVVDMSKPWTALDSLQKWASVVREHIDKLKIPP
EEMKEMEQKLIRDFQEYVEPGEDFPASPQRRTTASQEDKDDSVVLPLGADTLTQNLGIPV
LVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYI
VQKLYGFPYKIPAIVVEKDAVFIPAGWDNDKKIGILHENFQMLKAEDNFEDIITKPPVRK
FVHEKEIVAEDDQVFLMKLQSLLAKQPPTAAGRPVDASPRVPGGSPRTPNRSVSSNVASV
SPIPAGSKKIDPNMKAGATSEGVLANFFNSLLSKKTGSPGGPGVGGGSPGGGAGGGSSGL
PPSAKKSGQKPVLSDVHAELDRIARKPVTASPATPTSPTEGEAS
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtggggcgagtcggctctttcggttcctctacggcgggattaacctcgact
tacacgggcggtcccttggccaacgagctaacctcgggcaacggcggcgccgcggcaggg
gacgacgaggacgggcagaacctttggtcctgcatcctcagcgaggtctccacccgctcg
cgctccaagctccccgcggggaagaacgtgctgctgctgggtgaagatggagctggaaaa
acaagcttaataagaaaaattcagggaatagaggagtacaagaaaggaagaggattggaa
tatttgtacttaaatgttcatgatgaagacagggatgatcaaacaagatgtaatgtatgg
atcttggatggagacccgtatcacaaaggcctccttaaattttcactggatgccatttct
ctgaaggacactctagttacgttggttgttgatatgtcaaagccttggactgctttggat
tctttacagaaatgggcaagtgttgttagagaacatattgacaaattgaaaattcctcct
gaagaaatgaaagaaatggaacaaaagttgattagagactttcaagaatatgtagagcca
ggagaagatttcccagcttctcctcagagaagaactaccgcatcacaggaagacaaagac
gacagtgtggttttacctctgggtgcagatacacttacacagaacttgggcattccagta
ctagtagtttgcacaaagtgtgatgccattagtgtgttggagaaagaacatgactacaga
gatgagcatttcgattttattcagtctcatatccggaagttttgtttacagtatggtgca
gcacttatttacacttcagtaaaagaaaacaaaaatatagatttagtatataaatacatt
gttcagaaactctatggatttccctataagattcctgctattgttgtggaaaaagatgca
gtatttattccagcagggtgggataatgataagaagataggaatattacatgaaaatttt
caaatgttaaaagcagaagataattttgaagacatcataactaaaccacctgtccgaaag
tttgtgcatgagaaggaaattgtggcagaagatgaccaagtgtttcttatgaagctacag
tcccttttagcaaagcaaccaccaactgcagctggacggcctgtggatgcctcgccaaga
gtcccaggaggctcccctcgaacaccaaacagatctgtgtcgtccaatgttgccagcgtg
tcacccatccctgctgggtcaaaaaaaattgatccaaacatgaaagctggagctacaagt
gaaggtgtcctggcaaatttcttcaatagtttgctgagtaaaaagactggttccccagga
ggccctggtgttggtggtggtagccctggaggtggggctggaggtggaagcagtggttta
ccaccatctgccaaaaagtcaggccagaaacctgtcctatcagatgttcacgcggaacta
gacaggattgcacgaaaaccagttacagcttctcctgcaacacccacatctcctacggaa
ggagaagcttcttga
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