Phocoena sinus (vaquita): 116762594
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Entry
116762594 CDS
T07759
Symbol
TRIM38
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM38
KO
K12014
tripartite motif-containing protein 38 [EC:
2.3.2.27
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116762594 (TRIM38)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116762594 (TRIM38)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116762594 (TRIM38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
Fib_alpha
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_3
Trm112p
zf-C3HC4_2
zf-RING_10
zf-RING_6
PsbQ
RDM
Motif
Other DBs
NCBI-GeneID:
116762594
NCBI-ProteinID:
XP_032505651
Ensembl:
ENSPSNG00000005813
UniProt:
A0A8C9BIX2
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All DBs
Position
11:complement(83111054..83125315)
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AA seq
461 aa
AA seq
DB search
MASTPITKKMREEATCSICLQLITEPVSISCGHSYCHLCIVSFCEMQPWLEMFSCPQCRM
PFIMASLRPNKQLGNLIEAVKEMDQEMSCEEHGEKLHLFCEDEGQLICWRCDRGLQHKGH
TTALVEDACQGYKEKLQEAVTKLRQLEEECMNLKVFTAKQITEWNEKIEVQKQKIQSDFK
NLQSFLHEEEKSYLWKLEKEKEQTLRRLRDNEANLEQKSHELESYILQLEHKCQGSAQNL
LQDVKDTLSRSWAVKLEQPEAPSLDLHTVCNVSELYFDVKKVLRSYQVSVTLDPDTAYYE
LILSEDRRQVTRGCPQENLDTSSRRFSALPCILGCEGFTSGKHYFEVDVGEGTGWDLGVC
MENVQRDTVMVQTPQSGFWAIRLCKKNGYVALTSPLTSLQLREQPLVVGIFLDFEAGVVS
FYNMTTGSHIFTFPKASFSDTLRPYFQVYQYSPLFLPPPDE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaaccccaatcaccaagaagatgagggaggaagccacctgttccatctgtctg
caactgataactgagccagtgagcatcagctgtggacacagctactgccacttgtgcata
gtgagcttctgtgagatgcaaccatggctggagatgttctcctgtccccagtgtcggatg
ccatttataatggcaagcctccgacccaacaagcagctgggaaacctcattgaagccgtc
aaggagatggaccaggaaatgtcatgtgaggaacatggagagaagctccatctgttctgt
gaagacgagggccagctcatctgctggcgctgtgatcgaggattgcagcacaaagggcac
accacagctctggtggaagatgcttgccaaggttacaaggaaaagctccaggaagctgtg
acaaaattgaggcaactggaagaggaatgtatgaacctgaaggtgttcacggcaaagcaa
ataaccgaatggaatgagaagatagaagttcagaaacaaaaaatccagtctgactttaag
aatctccagagcttccttcatgaggaagagaagtcttacctatggaaactggagaaagaa
aaagagcagactctgaggagactgagggacaatgaggccaatcttgaacagaagagccat
gaactcgagagctacatcctgcaactagagcataaatgtcagggctcagcccaaaatctg
ctgcaggatgtgaaagatactttgagcaggagttgggctgtgaagctagaacaaccagag
gccccctctttggaccttcacactgtgtgcaatgtttctgagctttactttgatgtgaag
aaagtgttaaggagctatcaagtcagcgtgactctggatccagatacagcttattacgaa
ctaattctgtctgaggatcggagacaagtgactcgtggatgcccccaggagaatcttgat
acttcttctaggagatttagtgccttaccctgtatcctgggctgtgaaggcttcacctca
ggaaaacattactttgaagtggatgtgggagagggaactgggtgggatttaggagtctgt
atggaaaacgtgcagagggacactgtcatggtacagacgcctcagtctggtttctgggcc
atcagactgtgcaaaaagaatggctacgtagcgcttacctctcccctaacttcccttcag
ctaagggagcagcccctggttgtggggatatttctggacttcgaggctggagttgtatcc
ttttacaacatgaccactggttcccacatcttcaccttcccaaaggcctccttctctgac
actctccggccctatttccaggtctatcaatattctcctttgttcctgcctcccccagat
gagtaa
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