KEGG   Phocoena sinus (vaquita): 116762597
Entry
116762597         CDS       T07759                                 
Symbol
SNRNP48
Name
(RefSeq) U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1
  KO
K13156  U11/U12 small nuclear ribonucleoprotein 48 kDa protein
Organism
psiu  Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psiu03041]
    116762597 (SNRNP48)
Spliceosome [BR:psiu03041]
 Other splicing related proteins
  Minor spliceosome components
   Minor spliceosome specific factors
    116762597 (SNRNP48)
SSDB
Motif
Pfam: zf-U11-48K
Other DBs
NCBI-GeneID: 116762597
NCBI-ProteinID: XP_032505660
Ensembl: ENSPSNG00000012856
LinkDB
Position
11:complement(98789150..98806322)
AA seq 342 aa
MDGDPPPVEERRRLREELSEFVESCCRTLEEVTASLGWSLDRLDPGEEEAAEDEVAICPY
DSNHRMPKSSLAKHMVSCRLRKLGYTKEEEGKMYNSDFFYENAKIPSVTLNKDSQFQIIK
QARDAVGNDGDYYNQRMYSSLPVEVPLNHKRFVCDLTQADRLALYDFVIEETKKKRSDSQ
IIENDSDLFVDLAAKVNQDNSRKSPKSYLEILAEVRDYKRRRQSYRAKNVHITKKSYTEV
IRDVINVHMEELGSQWREEQENADDDVEKNEEGRSASVDSRQSGGSYLEAECSRHRRDRS
RSPHKRKRNKEKDKHWDSRRRKERLVARGPIPAPLPEWTCTS
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggatggcgatcctcccccggtggaggagcggcggcggctgcgggaggagctgagcgag
ttcgtggagagctgctgccggacgctggaggaggtgacggcgtcgctgggctggagcctg
gaccggctggaccccggggaggaggaggcggccgaggatgaagttgccatatgcccttat
gattccaatcatcgcatgcctaagtcgtctctagcaaagcacatggtatcttgtagattg
aggaaactgggctataccaaagaagaagagggtaaaatgtataattctgactttttctat
gagaatgcgaagataccttcagttaccttgaataaggactcacaattccagataattaaa
caagctagagatgcagttggaaacgatggtgattattataatcaaaggatgtattcttca
ttgcctgttgaagttcctctgaatcacaaacggtttgtttgtgatctaacccaagccgat
cgtcttgccctctatgattttgtaatcgaggagacaaagaaaaaacggtcagattctcaa
attattgaaaatgacagcgatctctttgtagacttggctgccaaagtcaatcaagataat
agtcgaaaaagtccaaaatcttaccttgaaatcctggcagaagtgagagattataaaaga
agacgccagtcctatagagctaagaatgttcacataaccaagaaatcatatactgaggtg
attcgggatgtgatcaacgtgcacatggaggaactcggcagccagtggcgggaggagcag
gagaatgcagacgacgatgtggagaagaatgaagaagggcggtcggcttcagtagactca
cggcagtctgggggaagctacctggaggcggagtgttcacgacatagaagggatcggagt
aggagcccgcataaacgcaaaagaaataaagagaaggacaaacactgggactcaagaaga
aggaaagagaggcttgtcgcacgtggacctatccccgccccgctgccagagtggacttgc
acctcttaa

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