Phocoena sinus (vaquita): 116762669
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Entry
116762669 CDS
T07759
Symbol
CCDC174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116762669 (CCDC174)
03041 Spliceosome [BR:
psiu03041
]
116762669 (CCDC174)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116762669 (CCDC174)
Spliceosome [BR:
psiu03041
]
Complex C
Other components
EJC/TREX
116762669 (CCDC174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
116762669
NCBI-ProteinID:
XP_032505830
Ensembl:
ENSPSNG00000022707
UniProt:
A0A8C9EFV0
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All DBs
Position
11:3535284..3560784
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AA seq
466 aa
AA seq
DB search
MDRKKKPLDVTASSLVDLKAELFRKQEEFKQEKLLKDAGVLGKPKPTTKKPSVWSRQNTG
VSNRAEKDAEQKIEEQKTLDKAREKLEEKAKLYEKMTKGAFIDEEVEDMYLVDFTQKLID
KRKEMEELGANRDYRKTERDDDEETVSEKDIPPPQDPSEEWVDYVDSLGRSRRCMRKDLP
HLLEMDKNLQGRLFVSPANEKTLLSEDMRKELQRQQWEEEERESLRRPMGPVHYEDIREN
EARQLGVGYFAFARDKELRNKQMKTLEMLREQTTDQRTKRENIKEKRKAMLEARLAKLRQ
KKMKTSKEDGAEEEVRDGDVIGPLPPEPEVMPAPHTAVQSSKVEVIVQERKDTRPGVPHI
REWDRGKDFSFGYWLKRQSDLRAERDPEFAPPSNYFVDQKRTGSLSSQAWNRPAPAQSDP
GQHSGQSPEPSSSHTSSTPAPSGPPQAQAVTFETLDDMISYYKQVT
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggaccggaagaaaaagcctttggacgtcacggcgtcctcgttggtagaccttaaggct
gaactcttccgaaaacaagaagaattcaaacaagaaaaacttctaaaagatgctggagtt
ttggggaaaccaaaaccaactactaagaaaccaagtgtctggagcagacaaaacacagga
gtttcgaatcgagctgagaaagatgctgaacagaagattgaggaacagaagactttggac
aaagcgagggagaaattggaagaaaaagccaaattatatgaaaaaatgactaaaggagcc
tttatagatgaagaagtggaggatatgtaccttgtggatttcacacagaagctcatagac
aaacgcaaagaaatggaagagcttggtgccaatagagattatagaaagacagaaagagat
gatgatgaagaaaccgtttctgaaaaagatatccctcctccccaggatcccagtgaagaa
tgggtggattatgtggattctttagggcgatcccggcgctgtatgagaaaggatttgcca
catctgctggaaatggataaaaatcttcaggggaggcttttcgttagtcctgcaaatgaa
aaaaccttactatctgaagatatgagaaaagaactccagcgccagcaatgggaggaagaa
gagagggagtccctgagaagaccaatggggcctgtacattacgaagacattcgtgaaaat
gaggcccggcaacttggtgttggatactttgcctttgcccgagataaagagttgagaaac
aagcagatgaaaactttagaaatgctgcgtgagcagacaacagaccagagaacaaaacga
gaaaatataaaggaaaagagaaaggctatgttagaagcaagacttgccaaactccgacaa
aaaaagatgaaaacatctaaagaggatggagcagaggaagaagttagagatggagatgtt
attgggccattgccaccagaaccagaggtcatgccagctcctcatacagctgtccagagt
agcaaagtcgaagtcatcgttcaggagaggaaggatacccggcctggggtgccacacatc
cgggagtgggacagaggaaaagacttttcctttgggtattggttgaagaggcaatcagat
ctccgggctgagagagaccctgagtttgccccaccatcgaattactttgtggaccaaaaa
agaactggttctctgagtagccaggcatggaacagacctgcacctgcacagagtgaccca
gggcagcactctggccagagccctgagcccagctcttcacatacatcatccactccagcc
cccagcggcccaccacaagcccaggcggtcacttttgaaactctggatgatatgatttca
tactacaaacaagtgacatga
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