Phocoena sinus (vaquita): 116762682
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Entry
116762682 CDS
T07759
Symbol
AGO1
Name
(RefSeq) protein argonaute-1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116762682 (AGO1)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116762682 (AGO1)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
116762682 (AGO1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
116762682 (AGO1)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
116762682 (AGO1)
microRNA pathway
RISC loading complex
116762682 (AGO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
116762682
NCBI-ProteinID:
XP_032505872
Ensembl:
ENSPSNG00000015633
LinkDB
All DBs
Position
1:28973229..29008796
Genome browser
AA seq
860 aa
AA seq
DB search
MEAGPSGAAAGTYLPPLQQVFQAPRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIK
PDKCPRRVNREVVEYMVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGE
GKDRIFKVSIKWLAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFF
SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRN
IDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQ
TVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS
TMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLPAPILQYGG
RVSRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISK
DAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTL
LGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVT
HPPAGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRF
KPTRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCAD
KNERIGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADEL
QILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHISGQSNGRDP
QALAKAVQVHQDTLRTMYFA
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgggaccctcgggagcagctgcaggcacctacctgccccccctgcagcaggtg
ttccaggcacctcgccggcctggcattggcaccgtggggaaaccaatcaagcttctggcc
aactactttgaagtggacatccctaagattgacgtctaccactacgaggtggatatcaag
ccggataagtgtcctcgcagagtcaaccgggaagtggtggaatacatggtccagcatttc
aagcctcagatctttggtgatcgcaagcccgtgtatgatggaaagaagaacatttacact
gtcacagcactgcccattggcaatgaacgggttgacttcgaggtgacaatccctggggaa
gggaaggatcgaatcttcaaggtctccatcaagtggctagccattgtgagctggcgcatg
ctgcatgaggccttggttagtggccagatccccgttcccctggagtctgtgcaagccctg
gatgtggccatgaggcacctggcatccatgaggtacacccctgtgggccgctccttcttc
tcaccgcctgagggctactaccacccgctggggggtgggcgcgaggtctggttcggcttt
caccagtctgtgcgccctgccatgtggaagatgatgctcaacattgatgtctcagccact
gccttctacaaggcgcagccagtgattgagttcatgtgtgaggtgctggacatcaggaac
atagatgagcagcccaagcccctcacggactctcagcgtgtgcgcttcaccaaggagatc
aagggcctgaaggtggaagtgacccactgtggacagatgaagaggaaataccgcgtgtgt
aatgttacccgccgccctgccagccatcagacgtttcctttgcagctggagagtggacag
actgtggagtgcacagtggcacagtatttcaagcagaaatataaccttcagctcaagtat
ccccacctgccctgcctgcaagttggccaggaacaaaagcatacctacctgcccctagag
gtctgtaacattgtggctgggcagcgctgcattaagaagctgactgacaaccagacttca
accatgataaaggctacagctagatcggccccagacagacaagaggagatcagccgcctg
atgaagaatgccagctacaacctagatccctacatccaggaatttgggatcaaggtgaag
gatgacatgacggaggtgacggggcgagtgctgccggcgcccatcttgcagtacggcggc
cgggtgagcaggaaccgggccattgcgacacccaatcaaggtgtctgggacatgcggggg
aaacagttctacaatggaattgagatcaaagtctgggccattgcctgcttcgcaccccaa
aaacagtgtcgagaagaagtgctcaagaacttcacagaccagctgcggaagatttccaag
gatgcagggatgcccatccagggccagccttgcttctgcaaatatgcgcagggggcagac
agcgtggagcccatgttccggcatctcaagaacacctactcagggctgcagctcattatc
gtcatcctgccagggaagacgccagtgtatgctgaagtgaaacgtgttggagatacactc
ttgggaatggctacacagtgtgtgcaagtgaagaatgtggtcaagacctcgcctcagact
ctgtccaacctttgcctgaagatcaatgtcaaacttggtggcattaacaacatcctagtt
ccacaccaacgctctgctgtctttcaacaaccagtgatattcctgggagcagatgttaca
caccccccagcaggggatgggaaaaaaccttctatcacagcagtggtaggcagtatggat
gcccaccccagccgttactgtgctactgtgcgggtgcagcgacctcggcaggagatcatt
gaagacttgtcctacatggtacgtgagctgctcatccagttctacaagtccacccgcttc
aagcctacccgcatcatcttctaccgagatggggttcctgaaggccagctcccccagatc
ctccactatgagctgctggccattcgtgatgcctgcatcaaactggaaaaggactaccag
cccgggatcacttatattgtggtgcagaaacgccatcacacccgccttttttgtgctgac
aagaatgagcgaattgggaagagtggtaacatcccagctgggaccactgtggacaccaac
atcacccacccatttgagtttgacttctatctgtgcagccacgcaggcatccagggcacc
agccgaccatcccattactatgtcctttgggatgacaaccgtttcacagcggatgagctc
cagatcttgacgtaccagctgtgccacacttatgtacgatgcacacgctccgtctcaatt
ccagcacctgcctactatgcccgcttggtggctttccgggcacgataccacctagtggac
aaggagcatgacagtggagaggggagccacatatcggggcagagcaatgggcgggacccc
caggccctggccaaagccgtgcaggttcaccaggatactctgcgcaccatgtacttcgct
tga
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