Phocoena sinus (vaquita): 116762717
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Entry
116762717 CDS
T07759
Symbol
NOTCH4
Name
(RefSeq) neurogenic locus notch homolog protein 4 isoform X1
KO
K20996
Notch 4
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu01522
Endocrine resistance
psiu04330
Notch signaling pathway
psiu04919
Thyroid hormone signaling pathway
psiu05165
Human papillomavirus infection
psiu05200
Pathways in cancer
psiu05206
MicroRNAs in cancer
psiu05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116762717 (NOTCH4)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
116762717 (NOTCH4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116762717 (NOTCH4)
05206 MicroRNAs in cancer
116762717 (NOTCH4)
09162 Cancer: specific types
05224 Breast cancer
116762717 (NOTCH4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
116762717 (NOTCH4)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
116762717 (NOTCH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank
Ank_2
Notch
Ank_3
Ank_4
Ank_5
EGF_3
NODP
EGF_Teneurin
NOD
EGF_2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
116762717
NCBI-ProteinID:
XP_032505958
Ensembl:
ENSPSNG00000015128
UniProt:
A0A8C9CH26
LinkDB
All DBs
Position
11:80226333..80250003
Genome browser
AA seq
1993 aa
AA seq
DB search
MQPPSLLLPPLLLLLCRSVVQTRGLQCGSFPEPCANGGTCLSLSQGQGTCQCAPGFLGET
CQFPDPCQDAQLCQNGGSCQALLPTLPSSPSPPSPLAPSFFCTCPSGFTGERCQAQLKDP
CSSFCSKMGRCHVQASGRPQCSCMPGWTGEHCQLRDFCSANPCVNGGVCLATYPQIQCRC
PPGFEGHACERDVNECFLDPGPCPKGTSCHNTLGSFQCLCPAGWGGPRCELRPGPCPPRG
CPNGGTCQVVPGRDSTFHLCLCPPGFTGPSCEVNPDDCVGHQCQNGGTCQDGLGTYTCLC
PEAWTGWDCSEDVDECEVQGPPRCRNGGTCQNSAGGFHCVCVSGWGGTGCEENLDDCVAA
TCAPGSTCIDRVGSFSCLCPPGRTGLLCHMEDMCLSQPCHREAQCNTNPLRGSTFCVCQP
GYTGPTCHQDLDECQMAQQGPSPCEHGGSCLNTPGSFDCLCPPGYTGSRCEADHDECLSQ
PCHPGSTCLDLLATFQCLCPPGLEGRLCEVETDECASAPCLNQADCHDLLNGFQCICRPG
FTGPRCEEDINECRSSPCANGGQCQDQPGSFHCKCLPGFEGPRCQAEVDECLSGPCPTGA
SCLDLPGAFLCLCPSGFTGHLCEIPLCAPNLCQPKQRCQDPEEEAHCLCPSGSPGCAPAE
DNCTCHHGHCQRSSCVCDVGWTGPECDTELGDCVSTPCAHGGTCHPQPFGFNCTCPTGYT
GPTCSEEVTACHSGPCLNGGSCSPSPGGYSCTCPLSHTGLRCQTSIDHCASAPCLNGGTC
VNRPSTYSCLCTTGFQGPRCEGRIRPSCADSPCRNRATCQDGPQGPRCLCPPGYTGGSCQ
TLIDSCAQKPCPHNSHCLQTGPSFQCLCLQGWTGPLCNLPLSSCQKAALSQGTEVSSLCQ
NGGICIDSGPSHFCHCPPGFQGSICQERVNPCESRPCQHGATCMAQPNGYFCQCTPGYSG
QNCSEEPDACQSQPCHNHGTCTPKPGGFHCACPPGFVGLRCEGDVDECLDQPCHPTGTAA
CHSLANAFYCQCLPGHTGQWCEVELDPCQSQPCSHGGSCEATAGPPPGFTCHCPQGFEGP
TCSHRAPSCGLHHCHHGGLCLPSHKPGFPPRCACLNGYGGPDCLTPPVPPGCGPPSPCLH
NGSCSETPGLGGLGFRCSCPPSSPGPRCQRPGAKGCEGRSGDGACDTGCSGPGGNWDGGD
CSLGVPDPWKGCPSHSRCWLLFRDGQCHPQCDSEECLFDGYDCETPPACTPAYDQYCRDH
FHNGHCEKGCNTAECGWDGGDCRPEDGDSEWGPSLALLVVLSPSTLDQQLLALARVLSLT
LRVGLWVRKDSDGRNMVYPYPGAQAEEELGGAPDPSHHERATPQTQPTGKETDSLSTGFV
VVMDVDLSRCGPDHPASRCPWDPGLLLRFLAAMAAVGALEPLLPGPLLAAHPRAGTEPPA
NQLPWPVLCSPVAGVLLLALGALLVLQLIRRKRREHGALWLPPGFTRRSQTQPVPRRRRP
PLGEDSIGLKALKPEAEVDEDGVVMCSGPKEGEEADQAEEMASPSKCQLWPLSSDCQELP
QAAMLTPPQDSEMDVPDVDTRGPDGVTPLMSAVCCGGVESRTYQETWLGSPEPWEPLLGG
GACPQVHTVGTGETPLHLAARFSRPTAARRLLEAGANPNQPDRAGRTPLHTAVAADAREV
CQLLLRSRQTAVDARTDDGTTALMLAARLAVEDLVEELIAAQADVGARDKWGKTALHWAA
AVNNARAARSLLQAGADKDALDGREQTPLFLAAREGAMEVAQLLLGLGAARGLRDQAGLA
PGDIARQRNHWDLLTLLEGAGPPEARHKATPGRGAGALQRARTASGSVPPRGGGAQPRCR
TLSAGAYPQARTLSVDLAAHGGGAHSHCRSLSKGAGEGPPLRGRRFSAGMRGPPSNHAIV
RGRSGVAAGSGGVASAVDWPCDWVALGACGPASNTPVPPPCLTPSPERGSPQVAWGPPAH
QVIPLNAGGEGEK
NT seq
5982 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccccttcactgctgctgccgccgctgctgctgctgctgtgtcggtcagtcgtc
cagaccagagggttgcagtgcgggagtttcccagaaccctgtgccaacggaggcacctgc
ctgagcctatctcaggggcaagggacctgccagtgtgcccctggcttcctgggtgagaca
tgccagtttccggacccctgccaggatgcccagctctgccagaatggaggcagctgtcaa
gccctgcttcccacccttcccagctcccccagccctccctctcccttggcccccagcttc
ttctgcacctgcccctctggcttcactggtgagaggtgccaggcccagctcaaggacccc
tgttcttccttctgttccaaaatgggccgctgccacgtccaggcctcaggccgcccacag
tgctcctgcatgccgggatggacaggtgagcactgccagctccgggacttctgctcagcc
aacccctgcgtcaacggaggggtgtgtctggccacatacccccagatccagtgccgctgc
ccacctggcttcgagggccatgcctgcgaacgcgatgtcaacgagtgtttcctggaccca
ggaccctgccccaagggcacctcctgtcataacaccctggggtccttccagtgcctctgc
cccgctgggtgggggggtccacgctgtgagctccggccaggaccctgcccccccaggggc
tgtcccaatgggggcacctgtcaagtggttccagggagagactccaccttccacctctgc
ctgtgtcccccaggcttcacaggcccaagctgtgaggtgaatccagatgactgtgtcggg
caccagtgtcagaacgggggcacctgtcaggatgggctgggcacctacacctgcctctgc
ccagaggcctggacaggctgggattgctctgaagatgtggacgaatgtgaggttcagggt
ccccctcgctgcagaaacgggggtacctgccagaactcagctggtggcttccattgtgtg
tgtgtgagcggctgggggggcacgggctgtgaggagaacctggacgactgtgttgccgcc
acctgtgccccaggttccacctgcatcgaccgtgtgggctccttctcctgcctctgtcca
cctggccgcacaggcctcctgtgccacatggaggacatgtgtctgagccagccgtgccac
cgggaagcccagtgcaacaccaaccccctgaggggctccacattctgcgtgtgtcagcct
ggctacacggggcccacttgccaccaggatctggacgagtgtcagatggcccagcaaggc
cccagtccctgtgaacacggcggctcctgcctcaacacgcccggctcctttgactgcctc
tgtccccctggctacacgggatcccgctgcgaggccgatcacgatgagtgcctgtcgcag
ccctgccaccctggcagcacctgcctggacttgctcgccaccttccagtgcctctgccca
ccaggcttagaagggcggctctgtgaggtagagacagacgagtgcgcctctgccccttgc
ctgaaccaggctgactgccacgacctgctcaatggcttccagtgcatctgccggcccgga
ttcactggcccccggtgtgaggaggacatcaacgagtgcagaagctctccctgcgccaac
ggtgggcagtgccaggaccagcctggatccttccattgcaagtgtctcccaggctttgaa
ggcccacgctgtcaggcggaggtggacgagtgtctgagtggcccatgccccactggagcc
agctgccttgacctcccaggagctttcctttgcctctgcccatctggctttacaggtcat
ctctgtgaaattcccctgtgtgcccccaacctgtgccagcccaagcaaagatgccaggat
ccggaggaagaggcccactgcctctgccccagtggaagccctggctgtgccccagctgaa
gacaactgcacctgccaccatgggcactgccagagatcctcgtgtgtgtgtgatgtgggt
tggacaggaccagagtgtgacacagagctgggggattgcgtctccacaccctgtgcccac
ggagggacctgccacccccaaccctttggcttcaactgcacctgccccacaggttacaca
gggcccacttgcagcgaggaggtgacagcttgtcactcagggccctgtctcaacggtggt
tcctgtagccccagccctgggggctactcctgcacctgccctctgagccacaccgggctc
cgctgccagaccagcattgaccactgtgcctctgcaccgtgcctcaatgggggcacctgt
gtgaacaggcccagcacctactcctgcctctgcaccacgggcttccagggcccacgctgc
gagggaaggatccgtcccagctgtgcggacagcccctgtaggaacagggcaacctgccaa
gacggccctcagggtccccgctgcctctgtccccctggctacacaggaggcagctgccag
acgctgatcgactcatgtgctcagaagccctgtccacacaattcccactgcctccagact
gggccctccttccagtgcctgtgcctccagggatggactgggcctctctgcaacctaccg
ctgtcctcctgccagaaggctgctctgagccaaggcacagaagtctcttccctgtgccag
aatggaggcatctgcattgacagcggcccctcccatttctgccactgtccccctggattc
caaggcagtatatgccaggagagggtgaacccctgtgagtccaggccctgccagcacggg
gccacctgcatggcccaacctaatggttatttctgccagtgtacaccaggctacagtgga
cagaactgctcagaggaacctgacgcttgtcaatcccagccctgtcacaaccatggaacg
tgcacccccaaacctggaggcttccactgtgcctgccctccaggctttgtggggctgcgc
tgtgagggggacgtggatgaatgtctggaccagccctgtcaccccacaggcactgcagcc
tgccactctctggccaatgccttctactgccagtgtctgcctggacacacaggccagtgg
tgtgaagtggagctagacccctgccagagccagccctgctcccacggagggtcctgtgag
gccacagcaggaccacccccaggattcacctgccactgcccccagggttttgaaggcccc
acctgcagccacagagccccctcctgcggtctacatcactgtcaccacggtggcctgtgt
ctgccctcccacaagcctggattcccaccccgctgtgcctgcctcaatggctatgggggc
cctgactgcctgaccccacccgtccctccaggctgtggccctccttctccatgcctacac
aatggcagctgctcagagacccctgggctggggggcctgggctttcgatgctcctgccct
cccagctctccagggccccggtgtcagaggcctggagcaaagggatgtgagggcagaagt
ggagatggggcctgcgacactggctgcagcggcccaggaggaaattgggatggtggggac
tgctccctgggggtcccagacccctggaagggctgcccctcccactctcggtgctggctt
ctcttccgggatgggcagtgccatccacagtgtgactctgaagagtgtttgtttgatggc
tatgactgtgagactcctccagcctgcactccagcctacgaccagtactgccgtgatcac
ttccacaatggacactgtgagaagggctgcaacactgcagaatgtggctgggatgggggc
gactgcaggcccgaagatggggactcggagtgggggccctccctggccctgctggtggtg
ctgagcccctcaaccctggaccagcagctgcttgccctggcccgggtgctgtccctgact
ctgagggtagggctttgggtaaggaaagatagtgatggcaggaacatggtgtacccctat
cctggagcccaggccgaagaggagctaggaggagccccagacccctctcaccatgagaga
gcaacccctcaaacacagcctacaggcaaggagacggactccctcagcactgggtttgtg
gtggtgatggatgtggacttgtcccgctgtggccccgaccatcctgcatcccgctgtccc
tgggaccctgggctcctgctccgcttccttgctgcgatggccgcagtgggggccctggag
cccctactgccaggacccctgctggctgcccaccctcgtgcaggcaccgagccccccgcc
aaccagcttccctggcctgtactgtgctcgccggtggccggggtgcttctcctggccctc
ggggctcttctcgtcctccagctcatccgccggaagcgccgagagcatggggccctctgg
ctgccccctgggttcactcgaaggtctcagactcagccagttccccgccgacgccggccc
ccgctgggcgaggacagcatcggcctcaaggcactgaaaccagaggcagaagttgatgag
gatggagttgtaatgtgctcaggccccaaggaaggagaagaggcggaccaggctgaagaa
atggcctcaccctccaagtgccagctctggcctctgagtagtgactgtcaggaactcccc
caggcagccatgctgactcctccccaggattctgagatggatgtccctgatgtggacacc
cgtggacctgatggggtgacacccctgatgtcagcagtctgctgtgggggagtggagtcc
aggacctatcaggagacatggttgggaagccctgagccctgggaacctctgctgggtgga
ggggcctgtccccaggttcacaccgtgggcactggggagactcccctgcacctggctgct
cgattctcccggccaaccgctgcccgccgcctccttgaggcaggagccaaccccaaccag
ccagaccgggcagggcgcaccccgcttcacaccgctgtggctgctgatgctcgggaggtt
tgccagctcttactccgcagcagacagactgcagtagatgcgcggacagacgatgggacc
acagccctgatgctggccgccaggctagctgttgaggacctggttgaagaactgattgca
gcccaagcagatgtgggggccagagataaatggggaaaaaccgcgctgcactgggccgcc
gccgtgaacaacgcccgggccgcccgctcccttctccaggccggagccgataaagacgca
ctggacggcagggagcagacgccgctgttcctggcggcccgagaaggagccatggaggta
gcccagctgctgctggggctgggagccgcccgagggctgcgggaccaagccgggctagcg
cccggggacatcgcacgccagcgcaaccactgggatctgctgacgctgctggaaggggcg
ggaccaccggaggctcgtcacaaagcgacgccgggccgcggcgccggcgccttgcagcgc
gcgcggactgcatcaggaagcgtgcccccgcgtgggggcggggctcagccgcgctgccgg
acgctgtcagctggagcctatcctcaagcccggactttgtccgtagacttggccgcccat
gggggcggggcccattcgcactgccgaagcctatcgaaaggagcaggagaaggcccgccc
ctccgcggccgtaggttttctgcaggcatgcgcgggcctccgtccaaccatgcaatagtg
cgaggaagatccggggttgcggccgggagcgggggtgtggcctcagctgttgactggccc
tgcgattgggtggctctaggagcctgcggccccgcctccaacactccagtcccacctcct
tgcctcactccgtcccctgagcggggatcccctcaagttgcatggggtcccccagcccac
caagtaatacccttaaatgcgggaggcgagggtgagaaataa
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