Phocoena sinus (vaquita): 116762736
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Entry
116762736 CDS
T07759
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
116762736 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116762736 (XPC)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
116762736 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
116762736
NCBI-ProteinID:
XP_032505989
Ensembl:
ENSPSNG00000022702
UniProt:
A0A8C9L0D9
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Position
11:complement(3054280..3089908)
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AA seq
959 aa
AA seq
DB search
MARKRTAAGESRGSELRSQMAAGRGPRGRESRSQTAKGESKARREEKEADVFEDEKPPKK
SVLSKVSRGKRKRGFGDSGDTADGPARKKAAKVTVKSENPQVIKDEAPSDGEDFRDFPSA
LKKVHRPEKEAAADKGGGEGGDEEESEEDWEEVEEVSEPVPGDVGESAAFSTSALPVKPV
EIEIETPEQVKARERSEKIKTEFETYLRRMMKRFNKEVREDTHKVHLLCLLANGFYRNSI
CSQPDLRAIGLSIVPTRFTKVPPQDVDVSYLSNLAKWFIGTFTVNADLSSNEQDGLQTTL
ERRFAIYSARDSEELVHIFLLILRALHLPTRLVLSLQPVPLKLPAAKGKKPSKERSTEGP
GGSSETSSQVPGKPSKPETSRGSRQEDMSSEGTGSAPDKAKGSKAAATRKKRREPSSSRK
EEGKAGGQTEGTQRRSRGRERQAAARVSYKEESGSDKASSSSDFELSSSDSHRPSDEDSE
PGLPRQRRAAAPQRMKVGSKRESRSQRGSDRQPPGFPEASVSASGSKRKRGKRKMPVDGE
EADGRRAAGVDQWLEVFSEQEEKWVCVDCVHGVVGQPLTCYQYATKPVTYIVGIDSDGWL
RDVTQRYDPAWMTVTRKCRVDAAWWAETLRPYRSPLVEREQQEDQEFQARHLDQPLPTVI
GMYKNHPLYALKRHLLKYEAIYPETAAILGYCRGEAVYSRDCVHTLHSRDTWLKQARVVR
LGEVPYKVVKGYSNRARRARLAEPQLQDYNDLGLFGKWQTEEYQPPVAVDGKVPRNEFGN
VYLFLPGMMPVGCVQLHLPNLHRVARKLNIDCAQAVTGFDFHKGYSHPITDGYIVCEEYK
DVLLAAWEDEQALIEKKEKEKREKRALGNWKLLVKGLLIRERLRLRYGAQSEEAAPHADA
GGGLSSDEEEGTSSPAEVARILAASWPQNREVEEKRKCPRKSRREEKEAASHLFPFEKL
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaagcgcacggcggccggggagtcgcggggaagcgagttgcgcagccagatg
gccgcgggcagggggccgcggggacgtgagtcacgcagccagacggccaagggcgagagc
aaagccaggcgcgaggagaaggaggcggatgtcttcgaagatgagaaacctccaaagaag
agtgttctctcaaaagtttcacgaggaaagaggaagagaggcttcggtgattctggggac
acagcagatggtccagcaagaaagaaagcggccaaagtgactgttaaatccgaaaaccct
caggttattaaggatgaagcccccagtgatggggaagatttcagggacttcccgagtgcc
ctcaagaaggtgcaccgtccagagaaagaggctgctgcggacaaaggtgggggtgaaggg
ggcgacgaggaagagagtgaggaggactgggaagaggtagaagaagttagtgagcccgtg
ccgggtgacgtgggggaaagcgcagccttctctacatccgctctgcccgtgaagcccgtg
gagatagaaattgaaacaccggagcaggtgaaggcaagagaaagaagtgaaaagataaaa
acggagtttgagacatatcttcggaggatgatgaaacgtttcaataaggaagtccgtgag
gacacacacaaggttcaccttctgtgtctgctggcaaatggcttctatcgaaatagcatc
tgcagccagccagatctgcgtgccatcggcctctccatcgtcccgactcgctttaccaaa
gtgccacctcaagacgtggacgtcagctacctgtcaaacctggcgaaatggttcattgga
acatttacagttaatgcagacctttcaagcaatgagcaggatggcctgcagacgacgctg
gagagaaggtttgctatttactctgcgagagacagtgaagagttggtccacatatttctg
ctgattctccgggccctacatctccctacccgactcgtattgtctctacagccagttcct
ctgaagttaccagcagcgaagggaaagaaaccttccaaggagagatccacagagggtcct
ggaggctcctcagaaacttccagccaagttcctggaaagccaagcaaaccagagaccagc
agaggaagcagacaagaggacatgtcttctgagggcactggtagtgcacctgacaaagcg
aaggggagcaaggcggctgccaccaggaagaagcggagagagccctcctccagcaggaaa
gaagagggcaaggccggggggcagacggaggggacccagaggcgttcgcggggccgggag
cggcaggcggccgccagggtgtcttacaaagaggagagcgggagtgacaaggccagcagc
agctctgactttgagctctccagctcggacagccatcgcccatccgacgaggattctgag
ccaggccttccaaggcagaggagggccgccgcccctcagaggatgaaggtggggtccaag
agggagtccaggtcccagcgtggaagcgaccgtcagccccctggctttccagaagcatct
gtaagcgcttccggcagtaagcgtaagagaggcaagcgtaagatgcccgtggatggtgag
gaggcggacggccggagagcagctggtgtggaccagtggctggaggtattctctgagcag
gaggagaaatgggtgtgtgtggactgtgtgcacggtgtggtgggccagcccctgacctgc
taccagtacgccaccaagcctgtgacctacatcgtgggcatcgacagcgacggctggttg
cgcgacgtcacacagaggtacgaccctgcctggatgacggtgacccgaaagtgccgggtt
gatgccgcgtggtgggccgagaccctgcgaccctaccggagcccgctggtggagagggag
cagcaggaggaccaggagtttcaggcgaggcacctggaccagcctctgcccaccgtcata
ggcatgtacaagaaccaccctctgtacgccctcaagaggcacctcctcaagtacgaggcc
atctaccctgagacggccgccatcctcgggtactgccgtggagaggctgtctactccagg
gactgcgtgcacacgctgcactccagggacacgtggctgaaacaggcccgagtggtgagg
cttggagaagtgccctacaaggttgtaaaaggctattccaaccgggcccggagagcccgc
ctggctgagccgcagctgcaggactacaatgacctgggcctgtttggcaagtggcagacc
gaggagtaccagccgccggtggctgtggacgggaaggtcccccggaacgaattcggcaac
gtgtacctcttcctgcccggcatgatgcccgtcggctgcgtccagctgcacctgcccaac
ttgcaccgcgtggcccgaaagctgaacatcgactgtgcccaggctgttacgggcttcgat
ttccacaaaggctactcccatcccataaccgatggctacatagtctgtgaggaatacaaa
gatgtgctcctggccgcctgggaggacgagcaggcgctcattgagaagaaggagaaggag
aaaagggagaagcgggctctgggaaactggaagctgctggtcaaagggctgctcatccgg
gagcggctgaggcttcgctacggggctcagagtgaggaagccgctccccacgcagacgca
ggaggaggactctcttcagacgaggaggaggggaccagctctccagcggaagtggccagg
atcctggcagcctcctggccccaaaaccgagaggtagaggagaagcggaagtgcccccgg
aagagcaggagggaggagaaggaggcagcttcccacctgttcccgtttgagaagctgtga
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