Phocoena sinus (vaquita): 116762745
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Entry
116762745 CDS
T07759
Name
(RefSeq) cytochrome b-c1 complex subunit 1, mitochondrial isoform X1
KO
K00414
ubiquinol-cytochrome c reductase core subunit 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00190
Oxidative phosphorylation
psiu01100
Metabolic pathways
psiu04260
Cardiac muscle contraction
psiu04714
Thermogenesis
psiu04932
Non-alcoholic fatty liver disease
psiu05010
Alzheimer disease
psiu05012
Parkinson disease
psiu05014
Amyotrophic lateral sclerosis
psiu05016
Huntington disease
psiu05020
Prion disease
psiu05022
Pathways of neurodegeneration - multiple diseases
psiu05208
Chemical carcinogenesis - reactive oxygen species
psiu05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
116762745
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
116762745
09159 Environmental adaptation
04714 Thermogenesis
116762745
09160 Human Diseases
09161 Cancer: overview
05208 Chemical carcinogenesis - reactive oxygen species
116762745
09164 Neurodegenerative disease
05010 Alzheimer disease
116762745
05012 Parkinson disease
116762745
05014 Amyotrophic lateral sclerosis
116762745
05016 Huntington disease
116762745
05020 Prion disease
116762745
05022 Pathways of neurodegeneration - multiple diseases
116762745
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
116762745
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
116762745
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116762745
Peptidases and inhibitors [BR:
psiu01002
]
Metallo peptidases
Family M16: pitrilysin family
116762745
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M16
Peptidase_M16_C
Vps39_1
M16C_assoc
GAS
Motif
Other DBs
NCBI-GeneID:
116762745
NCBI-ProteinID:
XP_032506010
Ensembl:
ENSPSNG00000007140
LinkDB
All DBs
Position
11:39532284..39541208
Genome browser
AA seq
525 aa
AA seq
DB search
MNIRGVVRQGAAERQVCGTAPAPRAPLRPLYACVARLSVHWSQKMAASAVCRAASAGTRV
LVRSRRSQPALLRSPVLRGIATYAQALQSVPETQVSQLDNGLRVASEQSSQPTCTVGVWI
DAGSRYETEKNNGAGYFVEHLAFKGTKNRPGIALEKEVESMGAHLNAYSTREHTAYYIKA
LSKDLPKAVELLADIVQNCSLEDSQVEKERDVILQELQENDASMRDVVFDYLHATAFQGT
PLAQAVEGSNENVRKLSRADLTEYLSRHYKASRMVLAAAGGVEHRQLLDLAQKHFCSLSG
TYAEDAVPTLTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPDNVALQVANAIIGHYD
CTYGGGTHLSSPLAAVAATKKLCQSFQTFNICYAETGLLGAHFVCDHMSIDDMMFFLQGQ
WMRLCTSATESEVVRGKNILRNALVSHLIGTTPVCEDIGRSLLTYGRRIPLAEWESRIAE
VDASIMREVCSKYFYDQCPAVAGLGPIEQLPDYNRIRSGMFWLRF
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaatatccgcggcgtcgtccgccagggagcagccgagcgccaagtctgcggtactgcg
cctgcgcctcgcgcgccgctgcgtccactctacgcatgcgtggcgcggctcagcgtccac
tggagccagaagatggcggcttccgcggtttgccgggcggccagcgccgggacgcgagtg
ctggtgcgcagccgccgctcgcagccggccctgctgaggtcgcctgtcttgcggggcatc
gccacctacgcccaggccctgcagagcgtgccggagacgcaggtcagccagctggacaac
gggctgcgagtggcctcggagcagtcctcccagcctacctgcacggtgggggtgtggatt
gatgctggcagccgttatgagactgagaagaacaacggggcaggctactttgtggagcat
ctggctttcaagggaacaaagaatcggcctggcattgccttggagaaggaggtagagagc
atgggggcccatcttaatgcctacagcacccgggagcacacagcttactacatcaaggca
ctgtctaaggacctgccaaaagctgtggagctcctggccgacattgtgcagaactgcagc
ctagaagactcccaggttgagaaggagcgtgatgtgatcctgcaggagctgcaggagaat
gatgcatctatgcgggacgtggtctttgactacctgcatgccacggcattccagggcaca
cctctagcccaggccgtggaggggtccaatgagaatgtcaggaagctgtctcgggcagac
ctgactgagtacctcagccggcattacaaggcctctcgaatggttttagcagcagctgga
ggggtggagcaccggcagctgctagacctcgcccagaagcacttctgcagcctctctggg
acatacgctgaagacgctgtgcccactctcactccctgccgcttcactggcagcgagatc
cgccaccgtgatgatgccctgcctttggcccatgtggccattgcagtggaggggcctggc
tgggccaacccggacaatgtggccctccaggtggccaatgccatcattggccactatgac
tgcacttacggtggtggcacgcacttgtccagcccactggctgcagttgctgcaaccaag
aagctgtgccagagtttccagaccttcaatatctgctatgcagagacagggttgctgggc
gcacactttgtctgcgaccacatgagcatcgacgacatgatgttcttcctacaaggccag
tggatgcgcctttgcaccagtgccacagagagcgaggtggtccggggcaaaaacattctc
agaaatgctctggtgtctcatctgatcggcaccactcctgtttgtgaggacattggacgt
agtcttctgacatatggccgccgcatccccctggctgagtgggaaagccggattgcggag
gtggatgccagtatcatgcgtgaggtctgctccaagtacttctatgatcagtgtccagca
gtggctggattggggcccattgaacagcttccagattataaccggatccgtagtggcatg
ttttggctgcgcttctag
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