Phocoena sinus (vaquita): 116762795
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Entry
116762795 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: Holliday junction recognition protein-like
KO
K26092
holliday junction recognition protein
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116762795
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Kinetochore proteins
Others
116762795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HJURP_mid
HJURP_C
Scm3
Motif
Other DBs
NCBI-GeneID:
116762795
NCBI-ProteinID:
XP_032506101
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Position
11:complement(65798627..65801429)
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AA seq
707 aa
AA seq
DB search
MEGEVLGEDVLLRKLRDSRHRFQRRMQQLIEKYNQPFEDAPVVQMSTLTYETPQGLRIWG
GRLIKERNTGQIQGSMVKMDDRTDGPMRVPAGGHELPLPCTQGEDSISSGTDTTLFQEDV
VAGNLMPAVPWSPLKNELRRKYLTQVDILLQDEGCLECASYGEGKDTRVTLVPSLASPAR
PARGYYGGISEESPGGPFQPTSLPREGDALHSCSAGLALVPRGDGISLXGGTGGSSFSSS
PCSEAEDVCNATLSDLYAGMLHSMSCLLGVRPSCVISTKTFIRQNWSPKRRHRCKSRMDR
TSCRGGRRSRRNPQERRPPGSEPAKDVAVLRDRENVLDVSGHKMGLKLGRAFFEVNKPQI
HAFASYWKELPRTPQKHHSSLTYLDSSAVYHLDQENRFMTLKWLISPVKIGSRPRVPPGE
GGNRYREIEIRFDKLHQEYCSNLRKQPCLTYLPGSSAVDMYRGGPASPGSPQGVEAHRPS
SPLCRAKAKRLSEAFESLGKGSIREGSCPPKSDSFPSLSKTNSTCSPGRSEQTSDLACQG
NDLGGFRKSVSLNKAISVPRVQPPACARDRHDDIKEKFDKLHQKYCQKSLQQTQVPLCTR
ASPDKASVGVWYQKEDFSGKFHPDSGSQGPPNLSSSPQQSIKSPLGSNTIRAPPSTGVAL
DASWGHQVPTKRCRLSDPQVCRRWAGPWDFSPVGRAIPRPGEEAGFS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgaggtcctgggagaggacgtgctgctgcggaagctcagggacagccgccac
cgcttccagaggcgcatgcagcagctgatagagaagtacaaccagcccttcgaggacgcc
ccggtggtgcagatgtccacgctgacctacgagacgccccagggattgcgaatttgggga
ggaagattaataaaggaaagaaatacaggacaaatccaggggtccatggtgaagatggac
gacaggacagatggacccatgcgagtcccagctggaggtcatgagcttcccttgccctgc
acacaaggtgaggattcaataagcagtggtactgatacaactttattccaagaagatgtg
gttgctggtaacttgatgcctgcagtgccctggagcccattgaaaaatgagctaaggagg
aagtacttgacacaagtggatatcctgctgcaggatgaagggtgtttggagtgtgccagt
tacggagagggaaaggacacccgtgtgaccctggtcccttcattggcctcgcccgccagg
cctgcccgaggatactacggtggcatctctgaagagagccccggtggcccatttcagcca
acctcattgcccagagagggtgatgctttgcactcttgctcagcaggcctggccctggtg
ccgaggggtgatggcatctccttatagggagggaccggtggcagcagcttctcaagcagc
ccatgctctgaggctgaggacgtctgcaatgcaacactcagtgatctgtacgcgggcatg
ctgcactccatgagctgcctgctgggtgtgaggccctcctgcgtcatctccaccaagacg
ttcatccgccagaactggagccccaagcggaggcacaggtgtaagagcagaatggacaga
acgagctgcagaggaggcaggcgctctcggaggaacccccaggagagacgtccacccggc
tccgaacctgcgaaggacgtggcagtgttaagagatcgcgagaacgtactcgatgtttct
ggccataagatgggtttaaaattgggaagggctttttttgaagtaaacaaaccccagatc
cacgcattcgcttcatattggaaggagcttccgagaacgcctcagaagcatcattcttca
ttgacttacttagactccagtgcagtgtatcatcttgatcaggaaaatagattcatgaca
ttaaagtggttgatttctcctgtaaaaataggttctagacccagagtaccgccgggcgag
ggagggaatcgttatagggagatcgaaatcagatttgacaagcttcatcaggaatattgc
tcgaatcttaggaagcagccctgcctgacttaccttcccggctcctcggctgtggatatg
tacagaggtggtccagcaagccctggtagcccccagggcgtagaagcccacaggccgagt
agccctctctgcagagcaaaagctaagaggttgagtgaggcttttgaaagcctgggcaaa
ggatctatcagagagggtagctgcccaccaaagagtgattccttcccttcactttcaaag
accaactccacgtgtagcccgggccgctcggagcagacctctgaccttgcttgtcaagga
aatgatctgggaggatttaggaagtcagtatcactcaacaaagccatttcagtacccagg
gtacaacctccagcctgtgccagggatcgtcacgatgacattaaagaaaaatttgacaag
cttcatcaaaagtattgccaaaaatcgcttcagcagacgcaggtgcctttatgtaccaga
gcatctccagataaagcaagtgtgggagtttggtatcaaaaagaagacttctcaggaaaa
ttccatccagactctggctcccagggtcccccaaacttgtcatcgtcaccccagcagagc
attaaaagtcccctcggctcaaacacaattagggcccctccatctacaggtgttgctctc
gatgccagctggggtcatcaagtccccacaaaacgatgccgattatcagaccctcaggtg
tgcagacggtgggctggaccctgggatttctcacctgtgggcagagctatcccgaggcct
ggggaagaggctggcttttcatag
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