Phocoena sinus (vaquita): 116762799
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Entry
116762799 CDS
T07759
Symbol
TTC21A
Name
(RefSeq) tetratricopeptide repeat protein 21A isoform X1
KO
K24178
tetratricopeptide repeat protein 21A
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psiu03037
]
116762799 (TTC21A)
Cilium and associated proteins [BR:
psiu03037
]
Motile cilia and associated proteins
Sperm associated proteins
116762799 (TTC21A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_TT21_2nd
ARM_TT21_C
ARM_TT21_N
ARM_TT21
ARM_TT21_5th
ARM_TT21_4th
TPR_19
TPR_2
TPR_14
TPR_16
TPR_8
TPR_12
TPR_1
TPR_6
ANAPC3
CFAP70_TPR_C
TPR_11
TPR_CcmH_CycH
TPR_17
RMD1-3
TPR_Slam
CFAP70_mid_TPR
TPR_9
TPR_Psidin_N
TPR_15
NatA_aux_su
T7SS_EccA1_N
Coatomer_E
TPR_YpiA
E_motif
PSMD12-CSN4_N
HHD_RTEL1
INTS1_RP2B-bd
Motif
Other DBs
NCBI-GeneID:
116762799
NCBI-ProteinID:
XP_032506110
Ensembl:
ENSPSNG00000010388
LinkDB
All DBs
Position
11:43139010..43169429
Genome browser
AA seq
1309 aa
AA seq
DB search
MSINDSSLMAGIIYYSQEKYFRHVQQAAAVGLEKFSSDPVLQFFKAYGVLREERIQDAIS
SLESIQNHPDVSLCSVMALIYAHKCCETIDRDAIQELESSLKEIRKTASGTALYYAGLFL
WLMGRHDKAKEYIDRTLKVSSSSREGYVLRGWVDLSSDKPHTVKKSIKYLEHGIQDTKDV
LGLMGKATYFMMLQNYSGALEVVNQITVAWGSFLPALVLKMRLFLARQDWERTVEMGHRI
LEKDESNIDACQILAVHELAREGNITTAAERVRNLIKALETREPQNPSLHLKKILVVGRL
SGRHQAILQLVCSFLERTFMATSSYAHVATELGYLFILQDQVKEASLWYSEAMKLDESSM
AALTGVIWCQILDGHLEEAEHQLEFLKEVQQSLGKSEVLVFLQALLASKKHKGEQEAAAL
LKEAAELHFSSTQALPLSTEYFERLDPLFLVCIAKEYLVFCPKQPRSPGQIVSPLLKQVS
VILNPVVKAAPALIDPLYLMAQVKYLSGELENAQSTLQRCLELDPTSVDAYLLMSQIYLA
QGNFAMCFHCLELGVSYNFQVRDHPLYHFIKARALNKSGDYPEAIKALKMIIKLPILKME
ESKKFHGPSVRPSERVSILLELADALRMNGELHEATKVMQDTINEFSGTPEEIRITIANV
DLALSKGNVDLALSILRNITPKQPCYTEAKEKMASIYLQTRKDVHLYIGCYRELCEHLPG
PHTSLLLGDAFMNIQEPEKALEVYDEAYRKNPHDASLISRIGQAYVKTHQYTKAINYYEA
AQKISGQDFLCCDLAELLLKLKKFNKAEKVLKQALDHDFVKDIPSLMNDVRCLLLLAKVY
KSHKKEDVMDTLNKAMDLQSRILKRVPLEQPEMIPSQKQLAASICIHFGEYYLAEKEYAK
AVQSYKDALSYSPIDNKVVLELARLYLLQGHLDLCEQHCAILLQTEKNHETASVMMADLM
FRKQKYEAAINLYHQVLEKAPDNFPVLNKLIDLLRRSGKLEDAPAFFELAKKVSSRVPLE
PGFNYCRGIYCWHMGQPNEALKFLNKARKDSTWGQSATYYMVQICLNPDNEIVGGEAFEN
LVTESKKELEQHGVRTAEKLLREFYPHSAWGQTQLRLLQSLCLLATREKANVEAALGTFT
EMAQAEKDSIPALLAMAQAYSLLKQVPKARTQLKRLAKVPWTLAEAEDLEKSWLLLADIY
CQGSKFDLASELLRRCMQYNKSCCKAYEYMGFIMEREQSYKDAATNYELAWKYSHHANPA
SGFKLAFNYLKDKRFVEAIEVCHDVLKEHPNYPRIREEILEKAQGSLRP
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcaatgattcctcccttatggctgggatcatttattacagccaagaaaagtac
ttccgccatgtgcagcaggccgcggccgtgggcctggaaaaattcagcagtgacccagtg
ctgcagttctttaaagcctatggagtcctcagggaagagcgcatccaggatgccatcagc
agcctagagagcatccagaatcacccagatgtgtccctgtgctccgtcatggctctcatt
tatgctcacaagtgctgtgaaaccatcgaccgagacgcgattcaggaacttgagagcagc
ctgaaggaaatccgcaagacagccagcgggactgccctgtactatgccggcctcttcctg
tggctcatgggccgccatgacaaggccaaggaatacattgatcgcacgttgaaggtctcc
agcagctccagagagggctacgtgctcagaggctgggtggacctcagctcagacaaaccc
cacactgtgaagaaatccatcaagtacctcgagcatggcattcaggacaccaaagatgtt
ctggggctgatgggaaaggcaacgtacttcatgatgctgcagaactactcgggggccctg
gaggtggtgaaccagatcaccgtcgcctggggcagtttcctgccggccttggtcctaaag
atgcggctgttcttggctcggcaggactgggagcgaacggtagaaatgggacacagaatc
ctagaaaaagatgaaagcaatattgatgcctgccaaattctagctgtgcatgagcttgca
agagaaggaaacataaccacagctgccgagcgtgttagaaatctgattaaggcgctggaa
acaagagagccccaaaatccaagcctgcatcttaaaaaaattcttgtggtgggcagactg
tctgggaggcaccaggcgattctgcagctggtgtgtagcttcctcgagcgaaccttcatg
gccacatcctcctacgcccacgtggccacagagctgggctacctctttatcctgcaggac
caagtgaaggaggcatctctgtggtactcggaggccatgaaactggacgagagcagcatg
gctgccttgactggggtcatctggtgccagatcttagacggccacctggaagaggctgag
catcagctggaattcctgaaggaggtgcagcagtcccttgggaagtccgaggtgctggtt
ttcctccaagccctcctggcttccaagaagcacaagggagagcaggaggccgcggcactg
ctgaaggaagcggctgagctgcacttctccagcacacaggccctccccctgagcaccgag
tactttgaaaggcttgaccccctcttcctggtctgcatcgccaaggagtatttggtcttc
tgccccaagcagccccggtcaccaggccagattgtgtctcctcttcttaaacaagtctct
gtgatcttgaatcctgtagtcaaggcagcaccagccctgatcgacccgctgtatttgatg
gcccaggtcaagtatctctcaggagagttagagaatgcccagagcaccctgcagcgttgc
ctggagctggaccccacctccgtggacgcctacctcctcatgtctcagatctacctggct
cagggcaactttgccatgtgcttccactgcctggagttgggcgtcagctacaacttccag
gtccgagaccaccccctctaccacttcatcaaggccagggccctcaacaagtctggagac
tacccagaagccataaaggcactgaagatgatcataaaattaccaattctgaagatggaa
gaaagcaagaagttccatgggccctctgtgcggcccagcgagcgggtatccatcttactg
gaattggcagatgccctccggatgaatggggagctgcatgaggccactaaggtcatgcag
gacaccatcaacgagttcagtggcacgccggaggagatccgcatcaccattgccaacgtg
gatttggccctgagcaaggggaacgtagacctggcactgagcattctgaggaacatcaca
cccaagcaaccctgctacacggaggccaaggagaagatggccagcatctacctgcagacc
cgcaaggacgtccacctctacatcgggtgctaccgggagctctgtgaacatctgcctggc
cctcacaccagcctgctactgggtgatgctttcatgaacattcaggagcccgagaaggcc
ctcgaggtctacgacgaggcctacagaaagaacccacacgacgcatccctgatcagcagg
attgggcaagcatacgtgaagacccaccagtacaccaaggcgattaattattatgaggct
gcccagaagattagtggacaggactttctgtgctgtgatctggctgaactgctcctgaag
ttaaagaagttcaacaaagcagaaaaagttttgaagcaggcactggatcatgactttgtc
aaagacatcccatccttgatgaatgatgtcaggtgcttgcttttgctggcaaaggtttac
aagagccataagaaagaagatgtgatggacactttgaacaaggccatggacctccagtct
cggatcctgaagcgtgttcccctggagcaaccagaaatgatcccctcccagaagcaactg
gcagcctccatctgcatccactttggggagtactacctggcagagaaggagtatgccaag
gcagtgcagtcttacaaagatgccctctcctactcacccattgacaataaggtggtgctg
gaactggcacggctctacctgctgcagggccacctggacttgtgcgagcagcactgcgcc
atcctcctgcagaccgagaagaaccatgagacagcctccgtgatgatggctgacctgatg
tttagaaaacagaaatacgaagctgccatcaacctctaccaccaagtcctggagaaagcg
ccagacaattttcctgtgttgaacaaactaatcgatctgctacgaagaagtggcaaactt
gaggacgcccctgccttctttgaattggccaagaaggtgtccagccgggtgcctttagag
ccagggttcaactactgcagaggcatctactgctggcacatggggcaacccaacgaagcc
ctgaagttcctaaacaaagcgcgcaaggacagcacttggggccagagcgccacctactac
atggtgcaaatctgtctgaacccagacaatgagatcgtgggtggagaggctttcgagaac
ctggtgactgagagcaagaaggagttggagcagcacggcgtgcgcactgctgagaagctg
ctgcgggagttctacccgcactcggcctggggccagacccagctgcggctgctgcagagc
ctgtgcctgctggccaccagggagaaggctaacgtggaggcggcgctgggcaccttcact
gagatggcccaggccgagaaggacagcattcccgccctgctggccatggcacaggcctac
tcgctgctgaagcaggtccccaaagcacgcacgcagctgaagcgtctggctaaggtccca
tggacactggccgaggccgaggacctggagaagagctggctcctgctggccgacatctac
tgccagggcagcaagttcgacctggcctcggagctgctgcggcgctgcatgcagtacaac
aagtcctgctgcaaggcctacgagtacatgggcttcatcatggagagagaacagtcatac
aaggacgcagccaccaactatgagctggcctggaagtacagccatcatgccaaccctgcc
agcggcttcaaactcgctttcaactacttgaaggacaagagattcgtggaggccatcgaa
gtctgccacgatgtcctcaaggagcaccccaactaccccagaatcagagaagaaattttg
gaaaaggcccaagggtctctgaggccctag
DBGET
integrated database retrieval system
