Phocoena sinus (vaquita): 116762853
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Entry
116762853 CDS
T07759
Symbol
RNF8
Name
(RefSeq) E3 ubiquitin-protein ligase RNF8 isoform X1
KO
K10667
E3 ubiquitin-protein ligase RNF8 [EC:
2.3.2.27
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116762853 (RNF8)
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116762853 (RNF8)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116762853 (RNF8)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116762853 (RNF8)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
116762853 (RNF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
Yop-YscD_cpl
zf-RING_6
Prok-RING_4
zf-ANAPC11
zf-RING_10
DUF6594
Golgin_A5
Motif
Other DBs
NCBI-GeneID:
116762853
NCBI-ProteinID:
XP_032506218
Ensembl:
ENSPSNG00000020781
LinkDB
All DBs
Position
11:67007700..67045642
Genome browser
AA seq
487 aa
AA seq
DB search
MGDPGSLVTEGRAGDRSWCLRRMGMNAEWLLLEDGNEVTVGRGFGVTYQLVSKICPLMIS
RNHCILKQNAEGQWTIMDNKSLNGVWLNRERLEPLKVYSIHNGDHIQLGVPLENKENAEY
EYEVTEEDWERIYPCLSPKSDQMMEKNKGLRAKRKFSLNELEGSGAEGPSNLKSKISKVS
CEPGQPVKSHGKGEVASQPSEYLDPKLTSLQLSGKTTGAHVDPGPAKVVELHYKKQKASN
PSASQSRLELFKVTMSRILKLKTQMQEKQVAVLNVKKQTQKGNSKKIVKMEQELQDLQSQ
LCAEQAQQQARVEQLEKTFQEEQQHLQRLEKEQGEEDLKQQLAQTLQEHRALMEELNRSK
KDFEAIIQAKNKELEQTKEEKAKVQAQKEEVLSHVNDVLENELQCIICSEYFIEAVTLNC
AHSFCSYCISEWMKRKIECPICRKDIKSKTHSLVLDNCINKMVDNLSSEVQERRIVLIRE
RKAKRLS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcctggctccctggtcacggaaggccgcgctggtgaccggagctggtgcttg
cggcgtatggggatgaacgccgagtggctgctgctggaggatggaaacgaggtgactgta
gggcgaggatttggtgtcacataccagttggtatcaaaaatctgccctctgatgatttcc
cgaaaccactgtattttgaagcagaatgccgagggccaatggacaattatggacaacaag
agtctgaatggcgtttggctgaacagagaacgtctagaacctttaaaggtctattctatc
cataatggagatcacatccagcttggggtgcctctggaaaataaggagaatgcagagtat
gaatatgaagttactgaagaagactgggagaggatttatccttgtctttccccaaaaagt
gaccagatgatggaaaaaaataagggcttgagagctaaaaggaaatttagtttgaatgaa
ttagagggttctggagctgaaggcccctcaaatttgaaatccaaaataagtaaagtgtct
tgtgaacctggtcagccagtgaagtcacatgggaaaggtgaagtggctagtcaaccctct
gaatatttggatcctaagttgacttctcttcagctaagtgggaagaccacaggggctcat
gttgacccaggccctgcaaaagttgtagagcttcattataagaagcagaaagcctcaaat
ccttcagcatctcagagccgcttagagctgtttaaggtaacgatgtccaggattctaaag
ctgaaaacacagatgcaggaaaagcaagtagctgttctgaatgtgaaaaagcagacccaa
aaagggaactcaaagaaaattgtgaaaatggagcaggaactgcaggatttacagtcccag
ctgtgtgcagagcaggcccaacagcaggccagagtggagcagctggagaagactttccag
gaagagcagcagcatctccagcgtttggagaaagagcaaggagaagaggacctgaagcaa
cagctagcccagactctgcaggagcatcgggctctgatggaagagctaaatcgcagcaag
aaggactttgaagcaatcattcaagccaagaacaaagaattggagcagaccaaggaagag
aaggcgaaggtgcaagcacagaaggaggaagttcttagccatgtgaatgacgtgctagag
aatgagctccagtgtattatttgttcagaatacttcattgaggctgtcaccttgaactgt
gcacatagtttctgctcctactgtatcagtgagtggatgaagcggaagatagaatgcccc
atttgtcggaaggacatcaagtcgaaaacccactccctggttctagacaattgcattaat
aagatggtagataatctgagctcggaagtgcaagaacgacgaattgtcctcatcagggaa
cgaaaagcaaagagactgtcctga
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