Phocoena sinus (vaquita): 116762885
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Entry
116762885 CDS
T07759
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03013
Nucleocytoplasmic transport
psiu03250
Viral life cycle - HIV-1
psiu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116762885 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116762885 (NUP153)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116762885 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116762885 (NUP153)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116762885 (NUP153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
116762885
NCBI-ProteinID:
XP_032506292
Ensembl:
ENSPSNG00000007852
UniProt:
A0A8C9BI40
LinkDB
All DBs
Position
11:90400971..90482939
Genome browser
AA seq
1478 aa
AA seq
DB search
MASGAGGIGGGGGGKIRTRRCHQGPIKPYQQGRQQHQQGILSRVTESVKNIVPGWLQRYF
HKSEDVCSCSTDTREVAQWPENREDDHIIYADEENPNIHDGRITPEPTVSNTEEPSTTST
ASNYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDD
DNISTTSGFSSRASDKDIAVSKNTSVPPLWSPEAERSHSLSQHTATSSKKPAFNLSVFGT
LSPSLGNSSVLKTSQLGDSPFYPGKTTYGGAAAAVRQSKLQNTPYQAPVRRQMKAKQLNA
QSYGVTSSTARRILQSLEKMSSPLVDAKRIPSVFSSPLNSPLDRSGIDTTTNFQARREKV
DSQHPPVQRLMTPKPVSIAANRTVYFKPSLTPSGELRKTNQRIDKKHSTGYEKNMTPGQN
REQRESGFSYPDFSVSAANGLSSGVGGGGGKMRRERTRFVASEPQEEEEMEVPVLPKISL
PITSSSLPTFNFSSSVITTSSPSPATPSQSLTNQVQMTSPNSTGSPLFRFSSPIVKSTEA
DVLPPSSIGFTFSVPVAKTAERCGTSSASEPLTRSSAQDITAVNSPSCKKKPDEDFKGPF
KPAKTLKEGSVLDVLKNPGFTSPKADSLAAQPTTTSLVVYSRPAISSFSSSGIGFGESLK
PGSSWQCDTCLLQNKVTDNKCVACQAAKLPPKDTAKQTGTGTPSKSGKPTVSAPETGFGD
KFKPAVGTWDCDTCLVQNKPEAIKCVACETPKPGTGVKRVLTLPVASESAVTVAASSSSC
TETTGALGFTDKFKRPVGSWECPVCCVSNNAEDNKCVSCMSQKPGSSIPASSSSTVSVSL
LSGGCLGLDKFKKPEGSWDCEVCLVENKADSNKCVACESAKPGTKSEFTGFSPSSSSSNP
ATSSFKFGIPSSSSGPSQTLTNTGNFKFGDQGGFKIGVSLDSGSVTPLSEGFKFSKPIGD
FKFGVSSDSKPEEVKKDSKNDNNFKFGLASGLSNPPSLAPFQFGVSSLGQQEKKEEPPKS
SSAGFGFGSGVINPPLAATDTTVTSESKSSFSFGTVDTKSVPGAPFTCQTPEAKKEETPA
SKGGFAFGSVDPAPLPSASLFVLGRTEEKQQEPVTSTSLVFGKKADSEEPKCPPVFSFGN
SEQTKDEGSSKSSTFSFSMAKPSEKESEQPTKATFAFGAQTSTTADQGTAKPVFSFLNNS
SSNSSTPATSAGGGIFGSSTSSSSAPAAAFVFGQANSPVSSSAFGNSAESSTSQSLLFSR
ESKPATTSSAGTAVAPFVFGPGASSSDTAASGFSFGAPTTSSSAGSSFVFGTGPSAPSAS
PAFGANQTPAFGQNQGASQPNPPGFGSLSSSAALFSAGSQPAAPTFGTVSSSSQPPVFGQ
QPSQSAFVSGTAPNSSSVFQFGSSATNFNFTNNNPSGVFTFGANASTPAASAQPSGSGGF
QFSQSPAAFSVGSNGKNSFSPGTAVSGRKIKTAVRRRK
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggagctggaggcataggagggggcggtggcggcaagatccggactcggcgt
tgccaccaggggccaattaaaccttaccagcaggggcgacaacagcaccagcagggcatt
ctcagcagggttacagaatctgttaagaatattgtgccaggatggttacagagatacttc
cacaagagtgaagacgtatgtagctgctcaacagacacaagagaggtggcacagtggccg
gaaaatagggaagatgaccatataatatatgctgatgaggagaaccctaacattcatgat
gggagaatcactcctgagccaacagtcagtaatacagaagaaccctcaacaactagtact
gcttcaaattatccagatgtattaacaaggccttctcttcatcggagccatctgaatttc
tccatgttggaatctcctgcgttacactgtcagccctccacatcttcggcattcccaatt
ggcagttctggattttccctcgtaaaggaaattaaagattctacctctcagcatgatgat
gataacatctcaaccaccagtggtttttcttcaagagcttctgataaagatatagctgtt
tcaaagaacacttcagtgccacctctgtggtccccagaggctgaacgttctcattcactc
tcacagcacactgccaccagctcaaaaaaaccagcattcaacttgtctgtctttggaaca
ctttctccttcacttgggaattcttcagttcttaaaacaagtcagcttggagattctcct
ttttaccctggaaaaacgacctatggtggggcagcagctgctgtaagacagtctaaacta
caaaacacaccctatcaggcaccagtcagaagacagatgaaagctaagcaactgaacgca
cagtcctatggtgtgactagttcaacagctcggaggatattgcagtctttagagaagatg
tcaagccctctagtggatgcaaaaagaattccatctgttttttcttctcctctgaattcc
cctcttgataggagtgggatagataccaccacaaattttcaggccagaagggaaaaggtg
gactctcaacacccccctgttcagagactcatgaccccaaagccagtttccatagcagca
aatcgaactgtttattttaaaccatctctgaccccatctggtgaattaaggaagactaat
caaagaatagataaaaagcacagtactggatatgaaaaaaatatgacaccaggacaaaat
agagaacagcgagaaagcggcttttcttacccagatttcagtgtgtctgcagccaatggt
ttgtcttctggagtaggtggtggaggtgggaagatgaggcgagagaggacgcgctttgtg
gcatctgaacctcaagaagaggaggaaatggaagtcccagtattaccgaaaatctctcta
cccatcaccagttcttcactgcctaccttcaattttagttcttctgtgattacaacttcc
tctccatcacccgctactccttcacaatcattaacaaaccaggtacaaatgacctctcca
aacagcactggcagccccttgtttagattttcatctccaattgtaaagtctactgaggca
gatgtactacctccatcatctattggatttacgtttagtgtgcccgtggcaaagacagca
gaacgttgtggcactagtagtgcctcagagccacttacaaggagttcagctcaagatatc
actgcagtgaacagtccaagctgtaagaagaaaccagatgaagatttcaagggccctttc
aaacctgcaaaaaccctgaaagaaggaagtgtcctagatgttctgaagaaccctggtttc
acatcaccaaaggcagattctcttgctgctcaacctaccaccacaagcctggtagtttat
tcaagaccagcaataagtagcttttcttctagtggaattgggtttggggaaagtttaaaa
cctgggtcatcgtggcagtgtgatacctgtctactccagaacaaagttacagacaacaaa
tgtgtagcctgtcaagcagcaaaattgccgccaaaagatactgctaaacagactggaact
gggacaccaagtaaaagtggcaaaccaactgtttctgcaccagagacaggctttggagac
aaatttaaaccagcagtaggaacttgggattgcgatacctgtttagtgcaaaataaacct
gaagcgataaaatgtgtagcttgtgaaacaccgaaaccgggaactggtgttaagcgagtc
cttacgttgccagtggcttcagaaagcgctgttactgtggctgcttcctcctccagctgc
actgagaccactggtgccttaggatttacagataaattcaaaaggcccgtgggatcttgg
gagtgtccagtgtgctgtgtttctaataatgcagaagacaataaatgtgtgtcctgtatg
tctcagaaaccaggaagttcaatacctgcttcaagtagcagcactgtctctgtctctctg
ttgtctggaggctgcctaggattggacaagttcaagaaacctgagggaagctgggactgt
gaagtgtgcctagtggagaataaagcagattctaacaaatgcgtagcatgcgagagtgca
aagccgggcacaaagtctgagtttacaggcttcagcccatcttcctcatcttcgaaccca
gcaacctcatccttcaaatttggtattccatcatcctcttctgggccttctcagacttta
acaaacactggaaattttaaatttggagatcaaggaggtttcaaaataggtgtgtcatta
gattctgggtctgtaacccctttgagtgaaggctttaaattttctaaaccaataggagat
tttaaatttggagtttcatctgattctaaacctgaagaagttaaaaaagatagtaaaaat
gataataattttaagtttggacttgcttctggtttaagcaatccgccttctttagctcca
tttcagtttggggtgtctagtcttgggcagcaagaaaagaaagaagaaccgccgaaatct
tcatctgcaggctttggctttggttccggtgtcattaaccctccccttgctgctactgac
accacagtgacctctgagagcaagagcagcttcagttttggaaccgtggacaccaagagt
gtcccaggggctcctttcacatgtcagacgccagaagcaaaaaaagaagaaacccctgcc
tccaaaggagggttcgcttttggcagcgtggaccctgcccccctgccatctgcctcgttg
tttgttttgggaagaacagaagagaaacagcaagagcctgtcacgtctacatctctagtg
tttgggaaaaaagctgacagtgaagagccaaagtgtccaccagtgttttcctttgggaac
tcagagcaaaccaaagacgagggttcttccaagtcttcgacctttagtttcagtatggca
aagccatctgagaaggaatctgaacagccaacgaaggccacttttgcttttggagctcaa
accagtactacagctgatcaaggtacagcaaagccagttttcagtttcttgaacaacagt
tcctctaattcaagtacaccagccacttcagctggtggtggcatatttggtagttccacc
tcatcctccagtgcgcctgcggctgcctttgtgtttggacaggccaacagtcctgtgagc
agctctgcctttgggaactctgccgaatccagtacatctcagtctttgctattttctcga
gagagcaaaccagcaaccacgtcgagcgcgggcacagccgtcgccccatttgtctttggt
ccgggtgccagcagcagtgatactgccgcctctggtttcagctttggagctcccaccaca
tcaagctctgcaggatcctcctttgtattcggcactggaccttcagcaccatctgccagt
ccagcgttcggtgctaaccagaccccagcatttggacaaaaccaaggtgccagccagcct
aaccccccaggctttgggtctctgtcatcttcagcagcattattttctgctggctctcag
cctgcggcacctacttttgggacagtgtcgagcagcagccagcctcctgtgtttggacag
cagcctagtcagtctgcatttgtctcaggaacagctcctaattccagttctgttttccag
tttggcagcagcgctacaaatttcaacttcacaaacaataatccatcaggagtgttcacg
ttcggggcaaatgccagcacacctgcagcctcagcccagccctctggctcggggggcttt
cagtttagccagtctccagcggcgttttctgtggggtcaaatgggaaaaactcattctct
cctggaactgcagtttctggtcgcaagataaagactgctgttagacgcaggaaataa
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