Phocoena sinus (vaquita): 116762916
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Entry
116762916 CDS
T07759
Symbol
CSPG5
Name
(RefSeq) chondroitin sulfate proteoglycan 5
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
psiu00535
]
116762916 (CSPG5)
Proteoglycans [BR:
psiu00535
]
Cell surface proteoglycans
Others
116762916 (CSPG5)
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Ortholog
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GFIT
Motif
Pfam:
Chon_Sulph_att
Neural_ProG_Cyt
Motif
Other DBs
NCBI-GeneID:
116762916
NCBI-ProteinID:
XP_032506369
Ensembl:
ENSPSNG00000009111
UniProt:
A0A8C9BLQ1
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Position
11:40354378..40368025
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AA seq
544 aa
AA seq
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MGRVEGGVPGRGPPPLLLLLWATLVLATGAAPVREAGRAVEADRQVKRVLAWEPRANDTR
EKAGPPAAREDKTSRTAPGGEQAVVGPGVGPEEALEASAAVTDTTWLEADSPGLGGVTAE
AGSGDTQALPATLAAPNEALGQSSTSPTTPEATEASGPLSPTPGDKLSPDPELPKESPLE
VWLNLGGSTPDPHGPEPTYPFQGTLEPHTASDIIDIDYFEGLDGEGRGADVGSFPGSPGT
SEHHPDPGEETPSWSLLDLYDDFTPFDESDFYPTTSFYDDLDEEEEDDKDAAGGRDLEDE
NENDLLVPTEKPGLGPGTSQPTGRWHAVPPQHTLGMVPGSSIALRPRPREPGRDLAPSEN
VTECRSGFVRHNGSCRSVCDLFPSYCHNGGQCYLVENIGAFCRCNTQDYIWHKGMRCESI
ITDFQVMCVAVGSAALVLLLLFMMTVFFAKKLYLLKTENTKLRRTNKFRTPSELHNDNFS
LSTIAEGSHPNDDSSAPHKIQEALKSCLKEEEPFNIQNSMSPKLEGGKGDQADLEVNCLQ
NNLT
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgagtcgagggcggggtcccgggtcgggggccgccgccgctgctgctgcttctg
tgggccacgctggtcctcgccactggggctgcaccggtgcgtgaggcgggcagagccgtc
gaggcagacaggcaggtgaagagagtcctggcatgggagccgcgtgctaacgacacgcgg
gagaaggccggcccaccagcagctagggaagataagacctctcggactgcgcccggcggc
gagcaggcggtggtgggccctggggtcgggccagaggaggctctggaggcatcggcggcg
gtgacagacacaacctggctggaggcggacagcccaggcctgggcggagtgacggcagag
gcgggcagcggcgacacccaggcccttccagccacgctcgcggctcccaacgaggccctc
gggcagtcatcgacgtcccccaccacccccgaggctacagaggccagcgggccactctcc
cccactcctggcgacaagctgagcccagaccctgaactccccaaggagagccccttggag
gtttggctgaacctgggaggcagcacacctgaccctcatgggccagagcccacgtacccc
tttcagggcacactagagccccacacggcgtcagatataattgacatcgactacttcgaa
ggattggatggtgagggccgtggcgccgacgtggggagcttccctgggtctccaggtacc
tcagagcaccaccctgatcctggggaagagaccccttcctggagcctgcttgacttatac
gatgacttcaccccctttgatgaatctgatttctaccctaccacatccttctatgatgac
ttggatgaagaagaggaggatgacaaggacgcagcaggaggcagagacctggaagatgaa
aatgaaaatgaccttctagtgcccactgagaaacctggtctggggcccgggacaagccag
cccactggtcggtggcatgcagtccctccacagcatactctggggatggtccccggcagc
agcatcgccctcaggccccgcccaagagagccaggcagggacctggccccaagcgagaat
gtcactgagtgccgcagtggctttgtgcgacataacggctcctgccggtcagtgtgcgac
ctcttcccaagttactgtcacaatggcggccagtgctacctggtggagaacataggggcc
ttctgcaggtgcaacacgcaggactacatctggcacaaggggatgcgctgcgagtccatc
atcactgacttccaggtgatgtgtgtggccgtaggctcggccgcccttgtgctgctcctg
ctcttcatgatgacggtgttcttcgccaagaagctctatctgctcaagacagagaacacc
aagctgcgcaggaccaacaaattccggaccccatctgagctccacaacgataacttctcc
ctctccaccattgctgagggctctcacccaaacgatgattctagtgctccccataaaatc
caggaagctctcaagtcctgcctgaaagaggaggagccatttaatattcagaactccatg
tcacccaaactcgagggtggcaaaggtgaccaggccgacttggaggtgaattgtcttcag
aacaacttaacctaa
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