Phocoena sinus (vaquita): 116762924
Help
Entry
116762924 CDS
T07759
Symbol
CNTN3
Name
(RefSeq) contactin-3
KO
K06761
contactin 3/4/5/6
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psiu04515
]
116762924 (CNTN3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
psiu00537
]
116762924 (CNTN3)
Cell adhesion molecules [BR:
psiu04515
]
Immunoglobulin superfamily
Contactins
116762924 (CNTN3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
psiu00537
]
Others
116762924 (CNTN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
C2-set_2
Pur_ac_phosph_N
Tissue_fac
C2-set_3
fn3_2
Motif
Other DBs
NCBI-GeneID:
116762924
NCBI-ProteinID:
XP_032506416
Ensembl:
ENSPSNG00000021869
UniProt:
A0A8C9EDG4
LinkDB
All DBs
Position
11:16251227..16510440
Genome browser
AA seq
1027 aa
AA seq
DB search
MMLSWKQLILLSFIGCLGGELLLQGPVFIKEPSNSIFPVGSEDKKVTLNCEARGNPSPHY
RWQLNGSDINLSMEYRYKLNGGNLVVINPNRNWDTGSYQCFATNSVGTIVSREAKLQFAY
LENFKTKTRSTVSVREGQGVVLLCGLPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGH
LYIAKVEPLDVGNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA
KGSTVKLECFALGNPVPQINWRRSDGLPFSTKIKLRKSNGVLEIPNFQQEDAGSYECIAE
NSRGRNVARGRLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKNGEALVL
EGRTQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKTPMKKLIQ
VQVGSEVSLDCKPRASPRALSSWKKGDAPVQETERISFLKDGGLKIANVTKADAGIYTCI
AENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGA
LTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGP
PEDVKVDEITDTTAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTATTVPEVIDGKTRTA
TVVELNPWVEYEFRVVANNKIGGGEPSLPSEKVRTEEAVPEVPPSDASGGGGSRSELVIT
WDPVPEELQNGEGFGYVVAFRPVGVSNWIQTVVTSPDTPRYVFRNESILPFSLYEVKVGV
YNNKGEGPFSPVTTVFSAEEEPTVAPSQVCANSLSSSEIEVSWNAVPWKLSNGHLLGYEV
RYWNNGEEGSSSKLKVAGNVTSARLHGLNSNLEYYTAVRAFNSAGTGPFSATVNATTKKT
PPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNMQVLNTNKTSAE
LLLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITNTDARGCTSAISNAHPVSSYISTVLF
FIVNTLW
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgtcatggaaacagttgatcctgctttcattcattggctgcctaggaggtgag
ctgctcttacaaggcccagtgtttatcaaagaacccagcaacagcatttttcctgttggt
tcagaggataaaaaagtaactttaaattgtgaagcacgaggcaacccttcacctcattac
agatggcagctgaatggaagcgatattaatctgagtatggagtatcgttataagttgaac
ggaggaaatcttgtggttattaaccccaacagaaattgggatacaggaagttatcaatgt
tttgcaacaaattcagttggaacaattgtcagcagagaagctaaactccagtttgcctat
ctggaaaattttaaaaccaaaacgagaagcacagtgtcagtgcgtgaaggacagggagtt
gtcctgctctgtggcctcccgccacactctggagaactatcatatgcttggatcttcaat
gaatatccatcatttgtcgaagaagatagtcggagattcgtctctcaagagacaggccac
ctctacatagccaaggtggaaccactggatgtgggaaattacacgtgtgtggtgactagt
atggtgacaaacgccagagtgctgggttctccaactcctttggtgctacgttccgatgga
gtgatgggtgaatatgaaccgaaaatagaagttcagtttccagaaactcttccagcagct
aaaggttcaactgtgaagttggaatgttttgcccttggaaatcctgtacctcagattaat
tggagaagaagtgatggactgcctttttccactaaaattaaattgaggaagtccaatggt
gtgcttgaaatccccaacttccaacaggaagatgcaggttcctatgaatgcattgctgag
aattcacgaggaagaaatgtcgccagggggcgtctgacttactatgcaaagcctcattgg
gttcaactcataaaagatgtggaaatagctgtggaggacagtctttactgggaatgtcga
gcgagtggtaagcccaaaccctcctaccgatggttgaaaaatggagaagcccttgtgctc
gaggggagaacacagatagaaaatggtgcccttacaatatccaacctaaatgtgaccgat
tctggcatgttccagtgcatagcagagaacaaacatggtctcgtctattctagtgctgag
ctcaaggttgtggcttctgctccagatttttcaaagactccgatgaaaaagttgattcag
gtgcaggtgggcagcgaggtcagcttggactgtaaacccagagcttcccccagggcgctc
tcttcctggaagaaaggagatgcacctgtacaggagactgaaagaatttcttttttaaaa
gatggaggactcaaaattgccaatgtgactaaagctgatgctggaatttatacgtgcata
gcagaaaaccagtttgggaaagcaaatggcacaacacacttggtggttacagaaccaaca
agaataactttggcaccatccaacatggatgtctcagtgggcgaaagtgtcattttgccc
tgccaggtgcaacacgaccccctattagacatcatgtttacctggtatttcaatggggcc
ctcacagattttaagaaagatggatctcactttgaaaaagtcggtgggagttcgtcaggc
gatttaatgatcagaaacattcagttgaaacacagtgggaaatatgtttgtatggtgcag
acaggggtggacagtgtttcatctgctgctgacctcatagtaagaggttcacctggacca
ccagaagacgtaaaggtagatgaaattacagatacaacagcccaactctcttggaaagaa
ggtacagacaaccacagcccagttatatcctattctgtccaggcacggacccctttctcc
gtgggttggcagacggccacaacagtgcctgaggtcattgatgggaaaacacgcacagct
acggtagtcgagttaaatccatgggtggaatacgaatttcgggttgtagccaataacaaa
atcggaggtggagaacccagtttaccctcagaaaaagtaagaactgaggaggcagtgccg
gaagtgcctccttcagatgccagtggaggaggtgggagccggtctgaactggtgatcacc
tgggatccagtccctgaagaactacagaatggtgaaggttttggatatgttgttgctttc
cgccctgttggagtaagcaactggatccagacagtggtcacatctcctgataccccaaga
tatgtctttagaaatgaaagcatcctgccattttcactgtatgaagttaaagtgggtgtt
tataataacaaaggtgaaggaccatttagcccagtgacaacagtgttctctgcagaagaa
gaacctacagtagctccatctcaagtttgtgcaaatagcttgtcttcctcagaaattgaa
gtttcttggaacgctgttccttggaagttgagcaatggacacttactcggctatgaggtg
cggtattggaataatggagaagagggatcatcgagcaaactgaaagtggcaggaaatgtg
acatcggccagactccatggcttgaacagcaacttggaatattacacggctgtccgggct
ttcaacagcgctggtaccggtccctttagtgccacagttaatgcaaccaccaagaaaact
cctcccagtcagccaccgggaaatgttgtttggaatgctacagacacgaaagtgttactt
aattgggagcaagtgaaagccatggagaatgaatcagaagtaacagggtacaaagttttc
tataggactagcagtcaaaataatatgcaagtgctaaacacaaacaaaacttcagctgaa
cttctgctgcccattaaagaggactacattattgaagttaaggccacaacggatggcggg
gatgggaccagtagcgaacagatcaggattccaagaataaccaatacggatgcaagaggt
tgtacatccgccatctccaatgcccaccctgtgtcaagttatatctctacagtactgttc
tttattgtaaacaccctgtggtga
DBGET
integrated database retrieval system
