Phocoena sinus (vaquita): 116763216
Help
Entry
116763216 CDS
T07759
Symbol
SYNJ2
Name
(RefSeq) synaptojanin-2 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00562
Inositol phosphate metabolism
psiu01100
Metabolic pathways
psiu04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
116763216 (SYNJ2)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
116763216 (SYNJ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116763216 (SYNJ2)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
116763216 (SYNJ2)
Membrane trafficking [BR:
psiu04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
116763216 (SYNJ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
116763216
NCBI-ProteinID:
XP_032506560
Ensembl:
ENSPSNG00000020311
LinkDB
All DBs
Position
12:complement(9235420..9334371)
Genome browser
AA seq
1480 aa
AA seq
DB search
MALSKGLRLLGRLEASGESSILLEARGRGDCLLFEAGTVATLAPEEKEVIKGQYGKLTDA
YGCLGELRLKSGGTSLSFLVLVTGCTSVGRIPEAEIYKITATDFYPLQEEAKEEDRLTAL
RKILTSGVFYFSWPNDGSRFDLTVRAQKQGDDSSEWGNSFFWNQQLHVPLRQHQVRCCDW
LLKVICGVVAVRTVYASHKQAKACLVSRISCERAGARFHTRGVNDDGHVSNFVETEQMIY
MDDGVSSFVQIRGSVPLFWEQPGLQVGSHHLRLNRGLEANAPAFDRHMVLLKEQYGKQVV
VNLLGSRGGEEVLNRAFKKLLWASCHAGDTPMINFDFHQFAKGGKLEKLENLLRPQLKLH
WDDFDVFARGKNVSPRFQKGTLRMNCLDCLDRTNTVQSFIALEVLHLQLESLGLNSKPIA
DRFVESFKAMWSLNGHSLSKMFTGSRALEGKAKVGKLKDGARSVSRTIQSNFFDGVKQEA
IKLLLVGDVYTEESADKGRMLLDNQALLVTPRILQAMSERQSEFTNFKPVRVAVGTWNVN
GGKQFRSNLLGTAELAEWLLDAPVSSGVSGSQDDSSPADIFAVGFEEMVELSAGNIVNAS
TTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDTVKTGMGG
KAGNKGAVAIRFQFHSSSFCFVCSHLTAGQSQVKERNEDYREITQRLSFPMGRSIFSHDY
VFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFHEGTIDFGPTY
KYDVGSAAYDTSDKCRTPAWTDRVLWWRKRHPFDRTAGDLNLLDNDLDADTKVGHAWSPG
ALKYYGRAELQASDHRPVLAIVEVEVQEVDVGARDRVFQEVSSFQGPRDATVVVNLQSPT
SEEKNEFPEDVRTELMQTLGSYGTILLVRINQGQMLVTFADSHSALSVLDVDGMKVKGRA
VKIRPKTKDWLQGLQEEIIGKRDSVASASPTANSCLLEENFDFTSLDYESEGDILEDDED
YLVDELRQPVVSDSEAGGDELADAPSSMAGAPPSRSPALTKKKQHPTYRDDADLVVLKQE
LEAVGDFRHRSPSRSLSVPNRPRAPHPPQRPPPPTGLMVKKSASDVSISSGTHGQYSILQ
TAKLLPGAPQQAPKARTGISKPYNVKQIKTTNAQEAEAAIRCLLEARGGAPGEAPNATAL
TDQGSSKPEPTAGVAPLLPRRPAPRVPAIKKPTLRRTGKPASPEEQLGHQAVHFTIGPPE
TNLDTPPLATAPPVPKPRTLQPGKGAAASGKPAPNEAPTAAAPPPPEAPPLVPQVPPRRK
KSAPAALHLPVLQSNYQLLQGPPCSSPSSDCPPAPLPAGGALFPQPAFLGPSSPASPEAD
GTKDTKSEAAPLLGDYQDPFWSLLHHRNLLNNSWLPKSPDPLDSGNRNLGRAHAAPQQVS
ASPAQEPPLEHREKDFGHWVTTSDKDKRTVLQVFDPLAKS
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggctttaagcaaagggctgcggctgctcgggcggctggaggcctcgggggagagcagc
atccttctggaggcacgcggccgcggggactgcttgctcttcgaggccggcacggtggcc
acgctcgctccagaagaaaaggaggtcattaaaggccagtatggaaagctcactgatgct
tatggctgcctgggggagctcaggttgaagtccggtggcacctccctgagcttcctggtt
ttggtgacgggctgcacatctgtgggcagaattccagaggccgaaatctacaaaatcacc
gccaccgacttttacccacttcaggaagaggccaaggaggaggaccgcctcacagccttg
aggaagatcctcacctcaggggtcttctacttctcgtggcccaatgatgggtctcgcttc
gacctcactgtccgggcacagaagcagggtgatgacagctccgagtggggcaactccttc
ttctggaaccagcagctgcacgtgcccctgaggcagcaccaggtgcgctgctgtgactgg
ctgctgaaggtcatctgcggggtggtggccgtccgcacggtgtacgcctctcacaagcag
gccaaggcctgcctcgtctcccgtatcagctgcgagcgcgccggtgctcgcttccacacc
cgaggcgtgaacgacgacggccatgtgtccaacttcgtggagacggagcagatgatttac
atggatgatggagtgtcgtcttttgttcagatcagaggctccgttccgctgttttgggag
cagccagggcttcaggtgggttcccatcatctgagactcaacagaggcctggaagccaac
gcccctgctttcgacaggcacatggtgcttctcaaggagcagtatgggaagcaagtggtc
gtgaacctgctggggagcagaggcggagaggaggtgctcaacagagccttcaagaagctg
ctctgggcttcttgccacgccggcgacacgcctatgatcaactttgacttccatcagttt
gccaaaggcgggaagctagagaaattggagaacctgctgaggccacagttgaagctgcac
tgggatgactttgatgtgtttgccaggggcaagaatgtaagtccacgttttcagaaaggc
actttgcggatgaactgtctcgactgcctggaccgaaccaacacggtgcagagcttcatc
gccctcgaggtcctccacctgcagcttgagagcctagggctgaattcaaagcccattgcc
gaccgcttcgtggagtccttcaaagccatgtggtctctgaacgggcacagcctgagcaag
atgttcacgggcagccgggccctggaagggaaggccaaggtggggaagctgaaggatggg
gcccggtctgtgtctcgcacaatccagtccaacttcttcgacggggtgaagcaggaggcc
atcaagctgctgctggtcggggacgtctacactgaagagtctgcggacaaaggaaggatg
ctgctggacaaccaggccctgctggtgactcccaggatcctgcaagccatgtcggagcgc
cagtcggagttcacgaatttcaagccggtgcgcgtcgccgtgggcacctggaacgtgaat
ggagggaagcagttcaggagcaacctgctgggcactgccgagctggctgagtggctgctg
gacgcgcccgtgtcttccggagtctctggatcccaggatgacagcagcccagctgacata
tttgccgtggggtttgaagagatggtggaactgagcgcagggaatatcgtcaatgccagt
accaccaacaggaagatgtggggtgagcagcttcagaaagccatctcacgctctcatagg
tacattctcttgacttcggcacagctggtgggcgtctgtctttatatctttgtacgtccg
taccacgtccccttcatcagggacgtggcgattgacacagtgaagacgggcatgggggga
aaggcggggaacaagggcgccgtggccatccgcttccagttccacagcagcagcttctgc
ttcgtctgcagccacctgacggccgggcagtcccaggtgaaggagaggaacgaggactac
agggagatcacccagaggctgagcttcccgatgggaagaagcatattttctcacgattac
gtgttttggtgcggcgatttcaactaccgcatcgatctcacttacgaagaagtcttctat
tttgttaaacgccaagactggaagaagctcctggaatttgatcagctacagctacagaaa
tcaagtggaaaaatttttaaagactttcacgaaggcaccattgactttggacccacctac
aagtatgatgttggctctgctgcctacgacacgagtgacaaatgccgcaccccggcctgg
acggacagggtcctgtggtggaggaagaggcatccttttgacagaacagctggagacctc
aaccttctagacaacgatctggacgctgacaccaaagtcggacacgcctggtctcctggt
gccctcaagtattacggccgagcagagctgcaagcgtctgaccacagacccgtgctggcc
atcgtggaggtggaagtgcaagaagtcgatgtgggtgctcgggacagggtgttccaggaa
gtgtcctctttccagggccccagggacgccaccgtcgtcgtcaaccttcagtcgccaacc
tccgaagagaaaaacgaatttcccgaggacgtgcgcacggagctcatgcagaccttgggc
agttacgggacgatcctgcttgtcaggatcaaccaagggcagatgctggtgacttttgca
gacagtcactcggcgctcagcgtcctggatgtggacggaatgaaggtgaaaggcagagct
gtgaagattcgaccgaagaccaaggactggctgcaaggtttgcaagaggagatcattgga
aagcgagacagcgtggcctccgcgtcccccaccgccaactcctgtctgctggaggaaaac
ttcgacttcacgagtctggactatgagtcagaaggggatattctcgaagacgacgaggac
tatctggtggatgagctgcgccagcccgtggtctcagacagtgaagcgggcggagacgag
ctcgccgacgcccccagctccatggcaggggcgcctcccagccggtcaccggcactcacc
aaaaagaagcagcatccaacctacagagatgatgctgacctggtggtgttaaagcaggag
ctggaagcagttggggacttccgccaccgctctccaagtcggtctctgtcggttcccaat
aggcctcgggcacctcacccaccgcagagacccccccctccaactggtctaatggtgaaa
aagtcagcctcggatgtgtccatctcctctggcacccacgggcagtattcgattttgcag
acagcaaaacttctgccaggagcacctcagcaagcacccaaagctaggactgggataagt
aagccttataacgtcaagcagatcaaaactaccaacgctcaggaggcggaagcagcaatc
cgatgtctcctggaagccagaggaggcgccccaggagaagccccaaacgccacagccttg
acggaccagggatcttccaaaccagagcccacagcgggggtggccccactcctgccccgt
cggcccgcacccagagttcctgccatcaagaagccaaccttgaggaggacaggaaagccc
gcgtcaccagaagaacagcttgggcatcaagctgtccattttacaatcgggcccccggag
acgaaccttgacacccctcctctagcaacagcccctcccgttcccaaaccgagaacactt
cagcccgggaaaggtgccgctgcctccgggaagccagcgccgaacgaggccccgaccgcg
gccgccccgccccctccggaggccccgcccctcgtgccccaggtgcccccgcggaggaag
aagtcggcgcccgcggccttgcacctgccggtgctgcagagcaactatcagcttctccag
gggcccccctgcagcagccccagcagcgactgtccgcccgcacccctgcctgctgggggc
gcgctcttcccccagccggctttccttggcccttcatcacctgcaagccctgaggctgat
ggcaccaaggacacgaagtcggaggccgcccccctcctcggtgattatcaggaccccttc
tggagccttctccaccaccgtaacctgttgaataactcctggcttcccaagagccctgac
cccctggactcggggaacaggaacctcggaagagcacacgcagccccccagcaagtcagt
gcctcacctgcccaggagccgccactggagcacagagaaaaagacttcggtcactgggtg
acaaccagtgacaaggacaagaggacggtgctgcaggtgtttgacccactggcgaaatca
tga
DBGET
integrated database retrieval system
