Phocoena sinus (vaquita): 116763390
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Entry
116763390 CDS
T07759
Symbol
SKI
Name
(RefSeq) ski oncogene
KO
K26503
Ski oncogene
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116763390 (SKI)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ski_Sno_DHD
c-SKI_SMAD_bind
Motif
Other DBs
NCBI-GeneID:
116763390
NCBI-ProteinID:
XP_032506929
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All DBs
Position
1:1106487..1171197
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AA seq
1255 aa
AA seq
DB search
MVSDLPLGALRASYAAFQKEPGSCRPTLGLGLAATWMQALPWNWWEAQRLAVCGDHLAGS
WGGRPCGQSSLGGVVSRLHRSGVPRTGCMMPVSRVGSPRCCNPNVCSNPHRAARCPCPMW
DVDRLARRPRCLRGDPGGEVGGGGCAAPSRPPLSCSAVVVGTLCGFLGSGGDAAAGRAPS
QPRRKLPPPDGGPGAQPPPPPPPSGLPAGGPERSRTGLSPGRAGPSGAERSRAEPSSGRA
CPSAAERARVPGRRAGPSTAECGGAPIRAGASRREDVRRAPRRRRRRGLRPPHRRSAVPE
AARARARAGGQAAEPGAGGGVGAGRAGRPAAGATRPASAAGTSRAGAARWEERGGGGGAP
REDGPAGPAPAPPLLPGPSASVAAAIRASRRRHLPARPPRAPGPRALALALAARAGACPA
PRARGARGGRAGGPGGGGGGRGAGRVDVAPGPGGGGLQRRDPFAPPAFPFAPPGEAEAAA
VIGREPAAGGGRGRGRGRRRGARGSGGGRGGPGARERERPGEPERTMEAAAGGRGGFQPH
PGLQKTLEQFHLSSMSSLGGPAAFSARWAQEAYKKESSKEAGAAAVPAPVPAAAEPPPVL
HLPAIQPPPPVLPGPFFMPSDRSTERCETVLEGETISCFVVGGEKRLCLPQILNSVLRDF
SLQQINSVCDELHIYCSRCTADQLEILKVMGILPFSAPSCGLITKTDAERLCNALLYGGA
YPPPCKKELAASLALGLELSERSVRVYHECFGKCKGLLVPELYNSPSAACIQCLDCRLMY
PPHKFVVHSHKALENRTCHWGFDSANWRAYILLSQDYTGKEEQARLGRCLDDVKEKFDYG
NKYKRRVPRVSEPPASVRKADDAPSQHPTPSEKDKQSGWLRTLAGSSSKSLGCIHPRQRL
SAFRPWSPAVSASDKELSPHLPALIRDSFYSYKSFETGVAPNVALAPPAQHKVASSPPCA
TVVSRAPEPVTSCIQPRKRKLTVDTPGAPETPAPGPAPEEEKDSEAEVEVEGREEFTSSL
SSLSSPSFTSSGSAKDLSSPGLLALPAAPGAPDAAAPADALSSGLEAELEHLRQALEGGL
DTKEAKEKFLHEVVKMRVKQEEKLSAALQAKRSLHQELEFLRVAKKEKLREATEAKRSLR
KEIERLRAENEKKMKEANEARLRLKRELEQARQARVCDKGCEAGRLRAKYSAQIEDLQVK
LRHAEADREQLRADLLREREAREHLEKVVKGLQEQLWPRPRSEPTGGESTAELEP
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggtctccgacttgccattgggggcccttcgagccagctacgcggcctttcagaaggag
ccaggttcctgcagacccaccctgggcctgggcctggcggcgacctggatgcaagccctg
ccctggaactggtgggaggcccagcggctggctgtgtgtggggaccaccttgcagggtca
tggggtggccggccctgcggccagtcatcccttgggggtgtcgtgtcgcgcctgcatcgc
tcgggggtccccagaacaggctgcatgatgcctgtgtcccgtgtggggtctccgaggtgc
tgcaatcccaacgtgtgtagtaacccacatcgtgctgctcggtgtccctgtcctatgtgg
gacgtggatcgtctggcccggcgtccccgttgcctgcgtggggaccccgggggggaggtg
ggcggtggagggtgtgccgccccgtcccgtccgccactcagctgctctgcggttgtagtg
gggaccttgtgtgggtttctgggctctggcggcgatgcggcggcgggtcgggcgccttcg
cagcctcgcaggaagctgccgccaccggatgggggacccggggcgcagccgccgcccccg
cccccgccgagtggccttccggcgggcgggcccgaacggagccgaacggggctgagtccc
ggacgggcggggccgagcggagccgagcggagccgagcggagccgagtagtggccgggcg
tgcccgagcgcagccgagcgggcccgagtcccgggccggcgggcgggcccaagcacggcc
gagtgcggcggagcgccgatccgagctggagcgagccgccgggaggatgtacgccgagcc
ccgcgccgccgccgccgccgcggtctgaggccgccccacaggcgctccgccgtcccggaa
gccgcgcgcgcgcgcgcgcgagcgggcgggcaggccgcggagccgggcgcgggcggcggg
gtgggcgcgggccgggccgggaggccggcggcgggcgcgacgcggccggccagcgccgcc
gggacgagccgggcgggcgccgcgcggtgggaggagcggggcggcggcggcggcgcgccg
cgcgaggacggcccggcgggccccgcgcccgcgcccccgctcctcccgggcccctcggcc
tcggtcgccgcggcgattcgcgcctcgcggcgccggcacctgcccgcgcgccccccgcga
gccccgggcccgcgagcgttggcgttggcgttggcggcgcgcgctggggcatgccccgcg
cctagggcccggggggcgcgcggggggcgcgcggggggcccgggcggcggcggcggcggg
cgcggcgcggggcgcgtggatgtggcgccgggcccgggcggcggcgggctccagcggcgg
gaccccttcgccccgcccgccttcccgttcgctccgccgggcgaggccgaggccgcggcc
gtgatcggccgggagccggcggcggggggaggccggggccggggccgggggcgccgccgg
ggcgcgcggggcagcggcgggggccgcgggggcccgggcgcgcgggagcgggagcggcct
ggggagccggagcgcaccatggaggcggcggcgggtggccgcggcggcttccagccgcac
ccggggctgcagaagacgctggagcagttccacctgagctccatgagctcgctgggcggc
ccggccgccttctcggcgcgctgggcgcaggaggcctacaagaaggagagctccaaggag
gcgggcgcggctgcggtgccggcgccggtgcccgcggctgccgagccgccgccggtgctg
cacctgcccgccatccagccgccgccgcccgtgctgcccgggcccttcttcatgccgtcc
gaccgctccacagagcgctgcgagaccgtgctggagggcgagaccatctcgtgcttcgtg
gtgggcggcgagaagcgcctctgtctgccgcagatcctcaactcggtgctgcgcgacttc
tcgctgcagcagatcaactcggtgtgcgacgagctgcacatctactgctcgcgctgcacg
gccgaccagctggagatcctcaaagtcatgggcatcctgcccttctcggcgccctcgtgc
gggctcatcaccaagacggacgctgagcgcctgtgcaacgcgctgctgtacggcggcgcc
tacccgccgccctgcaagaaggagctggcggccagcctggcgctgggcctggagctcagc
gagcgcagcgtgcgcgtgtaccacgagtgcttcggcaagtgcaaggggctgctggtgccc
gagctctacaacagcccgagcgccgcctgcatccagtgcctcgactgccgcctcatgtac
ccaccgcacaagttcgtggtgcactcgcacaaggccctggagaaccggacctgccactgg
ggcttcgactcggctaactggcgggcctacatcctgctcagccaggactacacgggcaag
gaggagcaggcgcgcctcggccgctgtctggacgacgtcaaggagaagttcgactacggc
aacaagtacaagcggcgggtgccccgggtctccgagcccccggcctccgtaagaaaagca
gacgatgccccctcccagcaccccacaccctccgagaaggacaagcagtctggctggctg
cggactctggccggctcctccagcaagagcctgggctgcatccaccctcgccagcgcctc
tctgccttccgaccctggtcccctgcggtttctgcgagtgacaaagagctctccccacac
ctcccagccctgattcgagacagcttttactcctacaagagttttgagacgggcgtggcc
cccaacgtggccctagcaccgccagcccagcacaaggtggcgagcagcccgccctgcgcc
acggtcgtctcccgggcccccgagcccgtcaccagctgcatccagcctcggaagcggaag
ctgacagtggacacccctggagccccggagacgccggcacccgggcctgcccccgaggag
gagaaggactcggaggccgaggtggaggtggagggaagagaggagttcacctcctcgctg
tcctcgctgtcctccccgtcctttacctcatccggctccgccaaggacctgagctccccg
ggcctgctcgccctgcctgcggcgcccggcgcccccgatgccgcggcccccgccgacgcc
ctgagcagcgggctggaggccgagctggagcatctgcggcaggccctggagggcggcctg
gacaccaaggaagccaaagagaagttcctgcacgaggtggtgaagatgcgcgtgaagcag
gaggagaagctgagcgccgcgctgcaggccaagcgcagcctccaccaggagctggagttc
ctgcgcgtggccaagaaggagaagctgcgggaggccacggaggccaagcgcagccttcgg
aaggagatcgagcggctccgggctgagaatgagaagaagatgaaggaggccaacgaggcg
cggctccgcctgaagcgggagctggagcaggcgcggcaggcgcgcgtgtgcgacaagggc
tgtgaggccggccgcctgcgggccaagtactcggcccagatcgaggacctgcaggtgaag
ctgcggcacgcggaggccgaccgcgagcagctgcgggctgacctcctgcgggagcgggag
gcccgggagcacctggagaaggtggtgaaggggctgcaggagcagctgtggccacggccc
cgctctgagcccacgggcggcgagagcacggccgagctggagccctag
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