Phocoena sinus (vaquita): 116763402
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Entry
116763402 CDS
T07759
Symbol
ASCC3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116763402 (ASCC3)
Enzymes [BR:
psiu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116763402 (ASCC3)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
116763402 (ASCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
AAA_19
T2SSE
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
116763402
NCBI-ProteinID:
XP_032506954
Ensembl:
ENSPSNG00000016505
UniProt:
A0A8C9CTQ3
LinkDB
All DBs
Position
12:57493416..57860056
Genome browser
AA seq
2201 aa
AA seq
DB search
MALPRLTGALRSFSNVTKQDNYNEEVTDLQLKRSKLHEQTVGLDLTWMKIVKFLNEKLEK
SEIQSVNEDLKDILQAAKQIVGTDNGKEAIESAAAFLFKIFHLKDSVGHKETKAIKQMFG
PFPSSSATAACNATNRITSRFCKDSLTALIQMTTDEYGDRVLFGKNLAFSFDMHDLDHFD
ELPINGESQKTISLDYKKFLTDHFQEHSAPDLKPVEKANDSFLWCEVEKYLNATLNEMAE
ATRIEDLCCTLYDMLASVKSGDELQDELFELLGPDGLELIEKLLQNRITIVDRFLNSSND
HKLQALQDNCKKILGENAKPNYGCQVTIQSEQEKQLMKQYRREEKRIARREKKAGEDGEI
AEGLLCFDPKELRIHREQALMNARNVPILSRQRDMDVEKIRYPHVYDSQAEAMRTSAFIA
GAKMILPEGIQRENNKIYEEVKIPYSEPMPVGFEEKPVYIQDLDEIGQLAFKGMRRLNRI
QSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHFQQGVIRKNEFKIVYVAPMK
ALAAEMTNYFSKRLEPLGIIVKELTGDMQLSKSEILRTQMLVTTPEKWDVVTRKSVGDVA
LSQIVKLLILDEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATF
LHVNPFIGLFYFDGRFRPVPLGQTFLGVKSANKVQQLNNMDEVCYESVLKQVKAGHQVMV
FVHARNATVRTAMSLIERAKNNGQISYFLPTQGPEYGHAEKQVQKSRNKQVRELFPDGFS
IHHAGMLRQDRNLVESLFFNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVD
LGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLSLLTQQNPIESQFLESLADNLNA
EIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGISHKAYQIDPKLAKHREQLVIEVGRK
LDKARMIRFEERTGYFSSTDLGRTASHYYIKYSTIETFNEFFDAHKTESDIFAIVSKAEE
FDQIKVREEEIEELDALLNNFCELSAPGGVENSYGKINILLQTYISRGEVDSFSLISDSA
YVAQNAARIVRALFEIALRKRWPAMTYRLLNLSKVIDKRLWGWASPLRQFSVLPPHILTR
LEEKNLTVDKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVTMEASIQPITRTVLRVTL
SICPDFTWNDQVHGTVGEPWWIWVEDPTNDHIYHSENFLVLKKQVISKEAQLLVFTIPIF
EPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPITALGCEAYEA
LYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNRYPTSKAVYIAP
LKALVRERMDDWKVRIEEKLGKKVIELTGDVTPDMKSISKADLIVTTPEKWDGISRSWQN
RNYVKQVTILIIDEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLA
DWLNIRQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVLI
FVSSRRQTRLTALELIAFLATEEDPKQWLNMDEREMENIIGTVRDSNLKLTLAFGIGMHH
AGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPI
TDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHLNAEIA
GGTITSKQDAMDYITWTYFFRRLIMNPSYYNLSDVSHDSVNKFLSNLVEKSLVELEHSYC
IEMGEDNRSIEPLTYGRIASYYYLKHQTVKMFKERLKPECGTEELLSILSDAEEYTDLPV
RHNEDHMNSELAKCLPLESNPHSFDSPHTKAHLLLQAHLSRTMLPCPDYDTDTKTVLDQA
LRVCQAMLDVAAHQGWLVTVLNITNLVQMVIQGRWLKDSSLLTIPHIENHHLHIFRKWSP
GIKGPRAGHPGSIECLPELIHACGGKDHGFCSMIEKELPAPKMKQAWSFLSHLPVIDVSL
SVKGWWDDSAEGHDELSITTVTSDKRNDNRWVRLHADQEYVLQVTLQRVSLGFHKGKQDS
HAVTPRFPKSKDEGWFLILGEVDKRELIALKRVGYVRNHHVVSISFYTPEVPGRYIYTLY
FMSDCYLGLDQQYDIHLHVTPASVSAQADEISDALTDLKVK
NT seq
6606 nt
NT seq
+upstream
nt +downstream
nt
atggctttacctcgtctcacaggagccttgcgctccttttcaaatgtcaccaagcaagat
aattataatgaagaagtgactgacttacagttgaagcggtctaaacttcatgaacaaact
gtaggtttggacctgacatggatgaagattgtaaaatttttgaatgaaaagctggagaag
agtgaaatacaaagtgtaaatgaagacttaaaagatatattgcaggctgcaaaacaaata
gttggaacggataatgggaaagaagcaattgaaagtgcggctgcatttctcttcaagata
tttcacttgaaggactctgttggtcacaaggagacaaaggctatcaaacagatgtttggt
ccctttccctcatcatctgccactgcagcttgtaatgctactaatcgaattacttctcgt
ttttgtaaagacagtcttactgctctcatccagatgacaacagatgaatatggtgataga
gttttatttggtaaaaatttagcattttcctttgacatgcatgatttggaccactttgat
gagctgccaataaatggtgaatcccagaaaactataagtttggattacaagaagtttctg
actgaccattttcaggagcattccgccccggacctcaagcctgtggaaaaagcaaacgac
tcctttttgtggtgtgaagttgagaagtacttaaatgcaactttaaatgaaatggctgaa
gcaacaagaatagaagatctttgctgtactttatacgatatgcttgcttctgttaaaagt
ggtgatgaacttcaggatgagctgtttgaactgctgggacctgatggacttgaacttatt
gagaaactcctccagaacagaattacaattgtggacagatttcttaattcttcaaatgat
cataagttgcaagctcttcaagacaattgcaaaaaaattttaggagaaaatgctaaacct
aattacggttgtcaagtcactattcagtctgaacaagagaagcagttaatgaaacagtat
cgccgggaagagaaaagaattgccagacgagaaaaaaaggctggagaagatggagaaatt
gcagaaggactcctgtgctttgatcctaaggaactgcggatacacagagagcaagcactt
atgaacgctagaaacgttccaattctgagcaggcagagagacatggatgttgagaaaata
cgttatccacatgtttatgattcccaggctgaagccatgagaacatctgcattcattgct
ggtgcaaagatgattttaccagaaggaatccaaagagagaacaacaagatatatgaagaa
gtaaagattccttatagtgaaccaatgccagttgggtttgaggaaaaaccagtttatatc
caagacttagatgagattggacagctggcttttaaaggaatgagaagactcaatagaatc
cagtcaattgtgtttgagactgcctacaacaccaatgagaacatgctgatttgtgcccct
actggagctggaaagaccaacattgcaatgcttacagttttgcatgaaattcgccagcat
tttcaacaaggtgttatcagaaagaatgaatttaagattgtatatgttgctccaatgaaa
gcgttggcagctgaaatgacaaattacttcagcaaacgtctagagccactgggcatcatt
gtgaaagaattgactggtgatatgcagttgtcaaaaagtgaaattttacgaactcagatg
cttgtgaccacaccagaaaaatgggatgtagtgacaagaaagagtgttggggacgtagct
ctttcccaaattgtaaagcttcttattcttgatgaagttcatttacttcatgaagataga
ggaccagtattagaaagcatagtggcacgtactttacgtcaggttgaatccacacagagt
atgataagaattcttggactctctgcaaccttacccaactacctcgatgttgctacgttt
ttacacgttaatcccttcattggacttttctactttgatggccgctttcgacctgttcct
cttggacagacatttctgggggttaaaagtgcaaataaggtgcaacagttgaataacatg
gatgaagtatgttatgaaagtgttttgaagcaagtaaaggctggacaccaggtgatggtg
tttgtacatgctcgaaatgccaccgtaagaacggctatgtctctaatagaaagagccaag
aataatggccagatttcctactttttacctactcaaggacctgaatatggacatgcagaa
aagcaggtgcaaaagtcaagaaataaacaagtacgagaattatttccagatggttttagt
attcatcatgcaggaatgcttcggcaggacagaaatttggttgaaagcttgttttttaat
gggcatatcaaagtcctggtctgtacagctacattagcctggggtgtcaatcttcctgct
catgctgttattattaagggaacacaaatatatgctgcaaaaagaggctcctttgttgac
cttggaattttagatgtcatgcagatatttggtcgagctggaagaccacaatttgacaaa
tttggggaaggaatcatcataacaacccatgataaactcagccattacctctctttgctc
actcaacaaaacccaattgagagtcagtttctggaaagccttgcagataacctaaatgca
gagattgctctgggaacagttactaatgtggaagaagcagtgaagtggataagttacact
tatctttatgtacggatgagagcaaatccattagtgtatggcatcagtcacaaggcttat
cagattgacccaaaattagcaaagcatcgagaacagttggtcattgaagttggacggaaa
ctagacaaagctcggatgattcgttttgaggaacgaactggatatttttcctcaactgat
ttgggtagaactgccagccactactatattaaatacagcactattgagaccttcaatgaa
ttctttgatgctcacaaaacagaaagtgatatttttgctatagtctccaaagctgaagaa
tttgatcaaatcaaggtcagagaagaggaaatagaggagttagatgccttattaaacaac
ttctgtgaactctcagctcctggaggtgtagagaacagttatgggaaaataaacatccta
ctacaaacttatatcagccgaggggaggtggacagtttctcccttatatcagattctgca
tacgttgcacagaacgcagctagaattgtccgtgctctttttgaaattgctctgaggaaa
cgttggcctgccatgacctataggctcctgaatcttagtaaagtcatcgacaagaggctc
tggggttgggctagccctttgagacaattttcagtcttaccaccacacattctaacaaga
ttagaagaaaaaaatcttactgtggataagctgaaagacatgaggaaagatgaaataggt
cacattctgcatcatgtgaatattgggctcaaggtcaaacagtgtgttcatcagattcct
tctgttacaatggaagcgtccattcagcccatcacacggactgtcctccgagtgacgctc
agcatctgtcctgacttcacttggaatgatcaggtccatgggacagtaggagaaccctgg
tggatttgggtagaagatcctacaaatgatcatatttatcattcagagaatttcctagtt
ctaaaaaaacaggtcattagtaaagaagctcaactgctggtgtttacaatccctattttt
gagcctttgccttctcaatattacatccgagcagtgtctgatcgatggttaggagctgag
gctgtatgtattattaactttcaacatctgattctaccagagagacatcctccccataca
gaattactggatcttcagcctttaccaatcacagctttgggatgtgaagcatatgaagca
ctatacaattttagccactttaaccctgtgcagacacaaatatttcatacgctgtatcac
acagactgtaatgtcctacttggagcgcccactggatcaggaaagactgttgcagctgaa
ttagccattttcagagtcttcaacaggtaccctacttcaaaggcagtatatattgcaccc
ttaaaagccctagtacgtgaaagaatggatgattggaaagttagaatagaagaaaaactt
ggtaaaaaagttattgaactaacaggggatgtaactcctgatatgaaatccatttccaag
gctgaccttatcgtcaccacaccagagaagtgggatggaatcagcagaagctggcagaat
aggaactatgtaaagcaagtcactattctcatcatagatgagatccatctgctaggggag
gaaagaggccctgttctagaagtcattgtatctcgaacgaatttcatctcatctcacacg
gaaaagcctgttagaatagttggactatctactgcattggctaacgccagagaccttgct
gactggctcaacattcgtcagatgggcttgttcaacttccgaccatcagtgcgtccagtt
ccactggaagttcacattcagggtttcccaggtcaacattactgtcctcgtatggctagt
atgaataagcctacatttcaggcaattagaagccattctccagccaaaccggttctgata
tttgtctcatcaagacgtcaaacccgtcttactgctttggaattgatagcctttctggct
actgaagaagatccaaagcagtggttgaatatggatgaaagagagatggagaatatcatt
ggcacagtaagagattccaacctgaagctgacacttgctttcggaataggaatgcatcat
gctggactacatgagagggaccgaaaaacagtagaggaactatttgtaaattgtaaagtt
caggttcttattgctacaagtacattagcctggggtgtaaactttccagctcatttagta
attattaaaggaacagaatattatgatggaaaaacaagacgatatgtggatttccccatt
acagatgtactccagatgatggggcgtgctgggaggcctcagtttgatgaccaaggcaaa
gctgtaattctggttcatgacataaagaaagacttttacaaaaaatttctttatgaacct
ttccctgtagagtcaagcttattaggagtgctctctgaccatttaaatgcggagattgct
ggtggtacaataacatctaagcaagatgcaatggattatatcacctggacttactttttc
cgacgtcttatcatgaaccccagctactacaatttgagtgatgtgagccatgattctgtg
aacaagtttctgtccaatctggttgagaagtccctggttgaattggaacattcctactgt
attgagatgggagaggataatcggagcattgaaccactgacatatggccggattgcctct
tactactatttaaagcaccaaacagttaaaatgttcaaggagcgtttgaaacctgaatgt
ggtactgaagaattgctttcaattctaagtgatgcagaagaatacacagatttgccagta
agacacaatgaagatcatatgaatagcgaactggcaaaatgtcttccattggaatcaaat
cctcattcatttgacagccctcacaccaaagctcatctcctactgcaggcacatctcagc
cgaaccatgctgccctgcccagattatgacactgataccaaaacagtgttggaccaagct
ctcagagtatgtcaggcaatgctggacgtggctgcacaccagggctggctggtgactgtc
ctgaacatcaccaacctggtgcagatggtgatccaggggcggtggttgaaagactcttct
cttcttacgataccacacatagaaaaccaccatcttcacattttcaggaaatggagccca
ggtataaagggtccacgtgccgggcaccctggctccatcgagtgcctccctgaactgatc
cacgcctgtggagggaaggaccatggattctgctccatgatagaaaaagagctaccggcc
ccaaaaatgaagcaggcatggagtttcttatctcatttgcccgtgatagatgttagctta
agtgttaaaggctggtgggatgactcagcggaaggacacgacgagctctctatcacaacc
gtgacttctgacaaacgcaacgacaacagatgggtcagattgcatgctgatcaagagtat
gtgcttcaagtcaccttgcagagagtcagccttgggttccacaagggaaagcaagacagc
catgcagtcacccctcgatttcccaaatcaaaagatgaaggatggtttttgatattagga
gaagtggataagagagaacttatcgctttgaaaagagtgggatatgtccgaaatcatcat
gttgtctccatctctttttatactcctgaagtacctggcaggtatatctacacactgtat
ttcatgagcgactgctaccttggcctggaccagcagtacgacatccacctccatgtcacg
ccggccagtgtttccgcacaggccgacgagatctccgatgccctgactgacctcaaagtg
aagtaa
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integrated database retrieval system
