KEGG   Phocoena sinus (vaquita): 116763489
Entry
116763489         CDS       T07759                                 
Symbol
UBAP2L
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
psiu  Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:psiu04121]
    116763489 (UBAP2L)
   03400 DNA repair and recombination proteins [BR:psiu03400]
    116763489 (UBAP2L)
Ubiquitin system [BR:psiu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    116763489 (UBAP2L)
DNA repair and recombination proteins [BR:psiu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     116763489 (UBAP2L)
SSDB
Motif
Pfam: UBAP2-Lig UBA_4 UBA_RAD5A GIP1_N UBA_8 CUE Comm
Other DBs
NCBI-GeneID: 116763489
NCBI-ProteinID: XP_032507182
Ensembl: ENSPSNG00000002900
LinkDB
Position
1:112969875..113013424
AA seq 1177 aa
MMTSVGTNRARGNWEPPQNQNQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDI
TGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQKDSGQTESNEEG
KENRDRDRDYSRRRGGPPRRGRGASRGREFRGQENGLDGTKSGGPSGRGTERGRRGRGRG
RGGSGRRGGRFSAQGMGTFNPADYAEPANTDDNYGNNSGNTWNNTGHFEPDDGTSAWRTA
TEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLGKTPSSMENDSS
NLDPSQAPSLAQPLVFSNSKQSAISQPASGNTFSHHSMVSMLGKGFGDVGEAKGSSTTGS
QFLEQFKTAQALAQLAAQHSQSGTTTTSSWDMGSTTQSPSLVQYDLKNPNDSTVHSPFTK
RQAFTSSSTMMEVFLQEKPPAVATSTAAPPPPSSPLPSKSTSAPQMSPGSSDNQSSSPQP
AQQKLKQQKKKASLTSKIPALAVEMPGSADISGLNLQFGALQFGSEPVLSDYESTPTTSA
SSSQAPSSLYTSTASESSSTISSNQSQESGYQSGPIQSTTYTSQNNAQGPLYEQRSTQTR
RYPSSISSSPQKDLTQAKNGFSSVQATQLQTTQSVEGATGSAVKSDSPSTSSIPPLSETV
SAASLLTTTNQHSSSLGGLSHNEEIPNSTTTQHSSTLSTQQNTLSSSTSSGRTSTSTLLH
TSVESEANLHSSSSTFSTTSSTVSAPPPVVSVSSSLNSGSSLGLSLGSNSTVTASTRSSV
ATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFP
TPTTPLTGRDGSLASNPYSGDLTKFGRGDASSPAPATTLAQPQQNQTQTHHTTQQTFLNP
ALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGY
GSHGYNTGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHSGTPAASFNLPSALGSGGPIN
PATAAAYPPAPFMHILTPHQQPHSQILHHHLQQDGQLPYLQMILCCQRQQEEQVMKLNDD
MLEPTPFQSPFHLHSLRELEEKRLHGHKSGYTNTNTLLSSLASRSSLVLLSSVSFSFYPS
PTLETLGYRNGKDSWGSIWSLGPQTVSLTFPEMGSQM
NT seq 3534 nt   +upstreamnt  +downstreamnt
atgatgacgtcggtgggcactaaccgagcccggggaaactgggaaccacctcaaaaccaa
aatcagacacagcacaagcagcggccccaggccactgcggaacaaattcgacttgcacag
atgatttcggaccataatgatgctgactttgaggaaaaggtgaaacaattgattgatatc
acaggcaagaaccaggatgaatgtgtcattgctttgcatgactgcaacggagatgtcaac
agagccatcaatgtactgctggaaggaaacccagatacgcattcctgggagatggttggg
aagaagaaaggagtctcaggacagaaggacagtggccaaacggaatccaacgaggaaggc
aaagaaaatcgagaccgggacagagactatagtcggcgacgtggtgggccaccaagacgg
gggagaggtgccagccgcggacgagagtttcgaggtcaggaaaatggattagatggcacc
aagagtggagggccttctggaagaggcacagaaagaggcagaagaggtcgtggccgaggc
agaggtggctctggtaggcggggaggaaggttttctgctcaaggaatgggaacctttaac
ccagctgattatgcagagccggccaatactgatgataactatggcaataatagcggcaat
acatggaacaacactggccactttgaaccagatgatgggacgagtgcatggaggactgca
acagaggagtggggaactgaagattggaatgaagatctttctgagaccaagatcttcact
gcctctaatgtgtcgtcagtgcctctgcctgcggagaatgtgacaatcactgctggtcag
agaattgaccttgctgttctgttggggaagacaccatcttcaatggagaatgattcatct
aatctggatccatctcaggctccttctcttgcccagcctctggtgttcagtaactcgaag
cagagtgccatatcacagcctgcttcagggaacacgttttctcatcacagtatggtgagc
atgttagggaaaggatttggtgatgtcggtgaagctaaaggcagcagcaccacaggctcc
cagttcttggagcaattcaagactgctcaggccctggctcagttggcagctcagcattct
caatctggaaccaccaccacctcctcttgggacatgggctccaccacacaatccccatcg
ctggtgcagtatgatttgaagaacccaaatgattcaacagtgcacagcccctttacaaag
cgccaggctttcacctcatcttcaaccatgatggaggtgttccttcaggagaagccacct
gcagtggctacctccactgctgcacctccacccccatcttctcctctgccaagcaaatcc
acctcggctccacaaatgtctcctgggtcttcagacaaccaatcgtccagccctcagccg
gctcagcaaaaactgaaacagcagaagaaaaaagcctccttgacttctaagattcctgct
ctggctgtggagatgcctggctcggcagatatctcagggctaaatctgcagtttggggcg
ttgcagtttgggtcagagcctgtcctttctgattatgagtccacccccaccacgagcgcc
tcttcaagccaggctccaagtagcctctataccagcacggccagtgaatcttcatccaca
atttcatctaaccagagtcaggagtctggttatcagagtggcccaattcagtcgacaacc
tatacctcccaaaataatgctcagggccctctatatgaacagagatccacacagactcgg
cggtaccccagctccatctcttcatcaccccaaaaggacttgactcaggcaaagaatggc
ttcagttctgtgcaggccacgcagttacagaccacgcaatctgttgaaggtgctacaggc
tctgcagtgaaatctgactcaccttccacttctagcatcccccctctcagtgaaacggta
tctgcagcttccttactgacgacaaccaatcagcactcatcttccttgggtggcttgagc
cacaatgaggagattccaaatagtaccaccacacaacacagcagcacgttatctactcag
cagaataccctttcgtcatcaacatcttctgggcgcacttcgacatccactcttttgcac
acaagcgtggagagtgaggcgaatcttcattcttcctccagcactttctccaccacatcc
agcacagtctctgcacctcccccagtggtcagtgtctcttccagtctcaatagtggcagt
agcttgggcctcagcctaggcagcaactctaccgtcacagcctccactcgaagctcagtt
gctacaacttcaggaaaagctcctcccaacctccctcctggggtcccgccgttgttgcct
aatccatatattatggctccagggctgttacatgcctacccgccacaagtatatggttat
gatgacttgcagatgcttcagacaagatttccattggattactacagcatcccatttccc
acacccaccactccgctgactgggagggatggtagcctggccagcaacccttattctggt
gacctcacaaagttcggccgtggggatgcctcctccccggccccggccacaaccttggcc
cagccccagcagaaccagacacagactcaccataccacgcagcagacattcctgaacccg
gcgctgcctcctggctacagttacaccagcctgccatactacacaggggttccgggcctc
cccagcaccttccagtatgggcctgctgtgttccctgtggctcctacctcttccaagcag
catggtgtgaatgtcagtgtgaatgcatcagccacccctttccaacagccaagtggatat
gggtctcatggatacaacactggtgtatcagtcacctccagtaacacaggcgtgccagat
atctcgggttctgtgtactccaaaacccagcagtcctttgagaaacaaggttttcattcc
ggtactcctgctgcctccttcaacttgccttcagccctaggaagtggggggcccatcaat
ccggccacagctgctgcctacccacctgccccctttatgcacattctgaccccccatcag
caaccgcactcccagatacttcaccatcacctgcagcaggatggccagctaccatatttg
cagatgattctctgttgccagcgccagcaggaggagcaggtaatgaaactgaatgatgat
atgcttgaacccactccttttcagtccccatttcacctccacagtctcagggaacttgaa
gagaaaagattgcacggtcacaaatcgggatacacaaacacaaacaccttgctgagctct
ctggcctcccgttcctctcttgtcctcctctcctcagtgtctttttctttctacccttcc
ccgactcttgaaacacttggttaccggaatggaaaggattcttggggcagcatctggagc
ctggggcctcagactgtctctcttacctttcctgaaatgggctcgcagatgtga

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