Phocoena sinus (vaquita): 116763540
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Entry
116763540 CDS
T07759
Symbol
LMBRD1
Name
(RefSeq) probable lysosomal cobalamin transporter
KO
K14617
LMBR1 domain-containing protein 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04977
Vitamin digestion and absorption
psiu04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
116763540 (LMBRD1)
04980 Cobalamin transport and metabolism
116763540 (LMBRD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116763540 (LMBRD1)
Membrane trafficking [BR:
psiu04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
116763540 (LMBRD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
Wbp11
TadE
CyanoTRADDas_TM
Motif
Other DBs
NCBI-GeneID:
116763540
NCBI-ProteinID:
XP_032507345
Ensembl:
ENSPSNG00000021540
UniProt:
A0A8C9EC39
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All DBs
Position
12:83913576..84032038
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AA seq
542 aa
AA seq
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MAAAAAAAGAASAELVIGWCIFGLLLLAILAFCWVYVRKYQSQRESEVVSTITAIFSLAI
ALITSALLPVDIFLVSYMKNQNGTFKDWANANVSRQIEDTVLYGYYTLYSVILFCVFFWI
PFVYFYYEEKDDDDTGKCTQIKTAFKYTFGFAVICALLLLVGAFVPLNLPDNKNSTEWEK
VKFLFEELGSSHGLAALSFSISSLTLVGMLAAIIYTAYGMSALPLNLIKGTRSAAYERLE
NTEDIEEVEQHIQTIKSKSKDGRPLPARDKRALKQLEERLRTLRKRERHLEFIENSWWTK
FGVALRPLKIIWGIFFILVALLFIISLFLSNLDKALHSAGIDSGFIIFGANLSNPLNMLL
PLLQTVFPLDYILITTIVMYFIFTSMAGIRNIGIWFFWIRLYKIRRGRTRPQALLFLCMI
LLLIVLHTSYMIYSLAPQYVMYGSQNYLIESNITYDARKGNSTLSVPKRCDADAPEDQCT
VTRTYLFLHKFWFFSAAYYFGNWAFLGVFVIGLIVSCCKGKKSVIEGVDEADSDLSDEEP
SV
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggcggcgggtgcggcgtcagccgagctggtgatcggctggtgc
atcttcggcctcctgctcctggctattttggcattctgctgggtatatgttcgtaaatat
caaagtcagcgggaaagcgaagttgtctccaccataacagcgatcttttctctggcgatt
gcgctcatcacatcagcacttctaccagtggatatatttttggtttcctacatgaaaaac
caaaatggtacatttaaggactgggccaacgctaatgtcagcagacagatcgaggacacc
gtattgtatggttactacaccttatattctgttatattattctgtgtgttcttctggatc
ccttttgtctacttctactatgaagaaaaggatgatgatgatactggtaaatgcactcaa
attaaaacggcattcaagtatactttcggatttgctgtgatttgtgcactacttctttta
gttggtgcttttgttccattgaatcttcccgataacaaaaattctacagagtgggaaaag
gtgaagttcctgtttgaagaacttggaagtagtcatggtttagctgccttgtcattttcc
attagttctctgaccctggttggaatgttggcagctataatctacacagcctatggcatg
tcggccttgcctttaaatctgatcaaaggcactagaagcgctgcttacgaacgtctggaa
aacactgaagacattgaggaagtggagcagcacatccaaacgattaaatcgaagagcaaa
gatggtcgacctttgccagcaagggataaacgcgccttaaaacaacttgaagaaaggtta
cgaacacttaggaaaagagagaggcacttagaattcattgaaaatagctggtggactaaa
ttcggtgttgccctgcgtcccctgaagatcatttggggaatatttttcatcttagttgca
ttgctgtttataatttctctcttcctgtccaatttggataaagctcttcattcagctgga
atagattctggtttcataatttttggagctaacctgagtaatccactgaatatgcttttg
cctttactacaaacagtgtttcctcttgattatattcttataacaactattgttatgtac
tttatttttacttcaatggcggggattcgaaatattggcatatggttcttttggattaga
ttgtataaaatcagaagggggagaaccaggccccaggcgctcttgtttctctgcatgata
cttctgcttattgtgcttcacactagctacatgatttacagcctcgccccccagtatgtt
atgtacggaagccagaactacctgatagagagcaatataacttatgacgcccgtaaaggc
aattcaaccctttctgtgccaaagagatgtgatgcagatgcccctgaagatcagtgtact
gtcacccggacctacctgttccttcacaagttctggttctttagtgctgcctactacttt
ggtaactgggcctttcttggggtgttcgtgattgggttgattgtctcctgctgtaaaggg
aagaagtcggtcattgagggggtagatgaggctgactcagacctgagtgatgaggaaccc
tctgtctga
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