Phocoena sinus (vaquita): 116763639
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Entry
116763639 CDS
T07759
Symbol
GJA1
Name
(RefSeq) gap junction alpha-1 protein
KO
K07372
gap junction alpha-1 protein
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04540
Gap junction
psiu05412
Arrhythmogenic right ventricular cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
116763639 (GJA1)
09160 Human Diseases
09166 Cardiovascular disease
05412 Arrhythmogenic right ventricular cardiomyopathy
116763639 (GJA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiu02000
]
116763639 (GJA1)
Transporters [BR:
psiu02000
]
Other transporters
Pores ion channels [TC:
1
]
116763639 (GJA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Connexin
Connexin43
Connexin40_C
DUF2681
DUF6377
Ammonium_transp
TEX29
Motif
Other DBs
NCBI-GeneID:
116763639
NCBI-ProteinID:
XP_032507549
Ensembl:
ENSPSNG00000010693
UniProt:
A0A8C9C1F9
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All DBs
Position
12:complement(40021061..40034705)
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AA seq
381 aa
AA seq
DB search
MGDWSALGKLLDKVQAYSTAGGKVWLSVLFIFRILLLGTAVESAWGDEQSAFRCNTQQPG
CENVCYDKSFPISHVRFWVLQIIFVSVPTLLYLAHVFYVMRKEEKLNKKEEELKAQTDDR
NLEMHLKQIEIKKFKYGIEEHGKVKMRGGLLRTYIISILFKSVFEVAFLLIQWYVYGFSL
SAVYTCKRDPCPHQVDCFLSRPTEKTIFIIFMLVVSLVSLGLNIIELFYVFFKGVKDRVK
GKNDPYHTTSSPLNHAKDCGSPKYAYFNGCSSPTAPLSPMSPPGYKLVTGDRNNSSCRNY
NKQASEQNWANYSAEQNRMGQAGSTISNSHAQPFDFPDDHQNSKKLDAGHELQPLAIVDQ
RPSSRASSRASSRPRPDDLEI
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactggagtgccttaggcaaactccttgacaaggttcaagcctattctaccgct
ggagggaaggtgtggctgtcagtccttttcattttccgaatcctgctactgggaacagca
gttgagtcagcctggggtgatgagcagtctgcctttcgctgtaacactcaacaacctggt
tgtgaaaacgtctgctatgacaaatctttcccaatctctcatgtgcgtttctgggtcctg
cagatcatatttgtgtctgttcccacactcttgtacctggctcatgtgttctacgtgatg
cgaaaggaagagaaactgaacaagaaagaggaggaactcaaagcccaaactgatgatagg
aatttggagatgcacttgaagcagattgaaataaagaagttcaagtatggcatcgaagag
catggcaaggtgaaaatgcgagggggtttgctgcgaacctacatcatcagtatcctcttc
aagtctgtctttgaggtagccttcttgctgatccagtggtacgtctatggattcagtttg
agtgctgtttacacttgtaaaagagatccctgcccgcatcaggtggactgcttcctttct
cgtcccacagagaaaaccatcttcatcatcttcatgctggtcgtgtccttggtgtctctt
ggcttgaacatcatcgaactcttctatgtcttcttcaagggtgttaaggatcgcgtgaag
ggaaagaatgatccttaccacactaccagcagcccactgaaccacgccaaagactgtgga
tctccaaaatatgcttatttcaatggctgctcctccccaaccgctcccctctcacccatg
tctcctcccgggtacaagctggttaccggagacagaaacaattcttcctgtcgcaattac
aacaaacaagcaagtgagcaaaactgggctaattacagtgcagaacaaaatcgaatgggg
caggcaggaagcaccatctctaactcccacgcacagccttttgatttccctgatgaccac
cagaattctaaaaagctcgatgctggccatgaactacagcctctagccattgtggaccag
cgaccttccagcagagccagcagtcgtgccagcagccgacctcggcctgatgacctagag
atctag
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