Phocoena sinus (vaquita): 116763659
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Entry
116763659 CDS
T07759
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116763659 (PRDM1)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116763659 (PRDM1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-met
Motif
Other DBs
NCBI-GeneID:
116763659
NCBI-ProteinID:
XP_032507581
Ensembl:
ENSPSNG00000014233
UniProt:
A0A8C9C6E8
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All DBs
Position
12:complement(53004768..53025692)
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AA seq
824 aa
AA seq
DB search
MLDICLEKRVGTTLAAPKCNSSAVKVPGLAEGTEGTMKMDMEDADMTLWTEAEFEEKCTY
IVNDHPWDSGTEGGTSVQAEASLPRNLLFKYATNSKEVIGVVSKEYIPKGTRFGPLIGEI
YTNDTVPKNANRKYFWRIYSRGELHHFIDGFNEEKSNWLRYVNPAHSAREQNLAACQNGM
NIYFYTIKPIPANQELLVWYCRDFAERLHYPYPGELTMMNLTQTQSHPKQQSTEKHELCP
KNVPKREYSVKEILKLDSHPSKGKDLYRSDISPLTSEKDADDFRKNGSPEMPFYPRVVYP
IRAPLPEDFLKASLAYGMERPPYIAHSPIPSSTTPSPSARSSPDRSLHSSPGNTVSPRAP
GSQEHRDPYAYLNAPYAAAAAEGLGSYPGYAPPPHLPPAFIPSYNAHYPKFLLPPYGMNC
NGLGAVGNINGLSSFGLFPRLYPVYGGLLGGGGLPPPMLAPASLPSSLPSEGARRLLQPE
HPREVLVPAPHSAFSLPGAAASLKDKACSPTSGSPTAGTAATAEHVVQPKATSAAAAAPG
GGGDEAVNLIKNKRNMTGYKTLPYPLKKQNGKIKYECNVCAKTFGQLSNLKVHLRVHSGE
RPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQ
CKVCPAKFTQFVHLKLHKRLHTRERPHKCAHCHKSYIHLCSLKVHLKGYCPVAPATGLPL
EDLTRINEEIEKFDISDNADRLEDMEDNVDVTSVVEKEILAVVRKEKEETGLKVSLQRNM
GNGLLSGCSLYESTDPSLLKLPHSNPLPLGPVKVKQETVEPMDP
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgttggatatttgcttggaaaaacgtgtgggtacgaccttggctgccccaaagtgtaac
tccagtgctgtgaaggttccagggttggcagaggggactgaggggaccatgaaaatggac
atggaggacgcggacatgactctgtggacagaggctgagtttgaggagaagtgtacatac
attgtgaacgaccacccctgggattctggcacggaaggaggcacttcggttcaggcagag
gcatccttaccgaggaatctgcttttcaaatatgccacaaacagcaaagaggttattgga
gtggtgagtaaagaatacataccaaaggggacacgttttggacctctaataggtgaaatc
tacaccaatgatacagttcccaagaatgccaacaggaaatatttttggcggatctattcc
cgaggggagcttcaccacttcatcgatggcttcaatgaggagaagagcaactggcttcgc
tacgtgaacccggcacattctgcccgggagcagaacctggccgcctgtcagaatggcatg
aacatctacttctacaccattaagcccatccccgccaaccaggagcttcttgtgtggtat
tgccgggactttgcggaaaggcttcactacccttatcctggagagctgacaatgatgaat
ctcacgcaaacccagagccatccaaagcagcagagcactgagaaacatgaactttgccca
aagaatgtcccgaagagagagtacagcgtgaaagaaatactaaaattggactcccacccc
tccaaagggaaggacttataccgctccgacatttcacccctcacttcggaaaaggacgcg
gatgactttcggaaaaatgggagccccgaaatgcccttctacccgcgggtggtgtacccg
atccgggcccctctaccggaagactttctgaaagcttccctggcctacgggatggagcgg
ccgccctacatcgcgcactcccccatcccgtcctccacgacgcccagcccctcggcgcgc
agcagcccagaccggagcctgcacagcagccccgggaacaccgtgtcgccgcgggccccc
ggctcccaggagcaccgggacccttatgcctacttgaacgctccgtacgccgccgccgcc
gctgaggggctgggctcctaccccggctacgcgccgcccccgcacctgccgcccgccttc
atcccttcctacaacgcgcactaccccaagttcctgctgcccccctacggcatgaactgc
aacggcctgggcgccgtgggcaacatcaacggcctcagcagcttcggcctcttcccgagg
ctataccccgtgtacggcggcctcctgggcgggggcggcctgcctcccccgatgctggcg
cccgcctcccttcccagctcgctgccctcggagggggcgcgccgcttgctgcagcccgag
cacccccgggaggtgctggtgcccgcgccgcacagtgccttctccctgcccggggcggcc
gccagcctgaaggacaaggcctgcagccccaccagcgggtccccgacggccggcaccgcc
gccacggccgagcacgtggtgcagcccaaagctacctcagcggccgcggcggcccccggc
ggcggcggcgacgaggccgtgaatctcatcaagaacaaaaggaacatgactggctacaag
acgctcccctaccccctgaagaagcagaacggcaagatcaagtacgagtgcaacgtctgc
gccaagacttttggccaactctcaaacctgaaggtccacctcagagtgcacagcggagaa
cggcctttcaaatgccagacttgcaacaaaggcttcactcagctcgcccacctgcagaaa
cactacctggtacacacgggagagaagccacatgaatgccaggtttgccacaagcgattt
agcagcaccagcaatctcaagacccacctgcgactccactccggagagaaaccttaccag
tgcaaggtgtgccccgccaagttcacccagtttgtgcacctgaaactccacaagcgccta
cacacccgggagcggccccacaagtgtgcccactgccacaagagctacatccatctctgt
agcctcaaggtccacctgaaggggtattgtcctgtggccccagccacggggctgcctctg
gaggacctgaccagaatcaacgaagaaatcgagaagtttgacatcagcgacaatgccgac
cggctggaggacatggaggacaacgttgacgtgacctctgtggtggagaaggagattctg
gccgtggtcagaaaagagaaagaagaaactggcctgaaagtgtctttgcaaagaaacatg
gggaatggactgctctcggggtgtagcctctacgagtcaacagacccgtccctcctgaag
ttgcctcacagcaacccactacctctgggacctgtaaaggtcaaacaagaaacagtcgaa
ccaatggatccttaa
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