Phocoena sinus (vaquita): 116763676 Help Entry 116763676         CDS       T07759                                  Symbol THBS2 Name (RefSeq) thrombospondin-2 isoform X1   KO K04659   thrombospondin 2/3/4/5 Organism psiu  Phocoena sinus (vaquita) Pathway psiu04145   Phagosome psiu04151   PI3K-Akt signaling pathway psiu04510   Focal adhesion psiu04512   ECM-receptor interaction psiu04820   Cytoskeleton in muscle cells psiu05144   Malaria psiu05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:psiu00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     116763676 (THBS2)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     116763676 (THBS2)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     116763676 (THBS2)   09144 Cellular community - eukaryotes    04510 Focal adhesion     116763676 (THBS2)   09142 Cell motility    04820 Cytoskeleton in muscle cells     116763676 (THBS2)  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     116763676 (THBS2)   09174 Infectious disease: parasitic    05144 Malaria     116763676 (THBS2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:psiu04131]     116763676 (THBS2)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:psiu04147]     116763676 (THBS2)    00536 Glycosaminoglycan binding proteins [BR:psiu00536]     116763676 (THBS2) Membrane trafficking [BR:psiu04131]  Endocytosis   Phagocytosis    Opsonins     116763676 (THBS2) Exosome [BR:psiu04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    116763676 (THBS2)   Exosomal proteins of colorectal cancer cells    116763676 (THBS2)   Exosomal proteins of bladder cancer cells    116763676 (THBS2) Glycosaminoglycan binding proteins [BR:psiu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    116763676 (THBS2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_ADAMTS TSP1_CFP_C EGF_3 EGF Laminin_G_3 Laminin_G_2 cEGF Motif Other DBs NCBI-GeneID:  116763676 NCBI-ProteinID:  XP_032507615 Ensembl:  ENSPSNG00000009838 LinkDB All DBs Position 12:847248..875357 Genome browser AA seq 1171 aa AA seqDB search MLWPLLLLALWPWYGARAGDQDEDTAFDLFRISSINRKTIGAKQFRGPDPSVPAYRFVRF DYIPPVSAEHLGRIAEAMRRNEGFFLTASLKQDRKSRGTLLALEGPGATHRQFEIVSNGP ADTLDLTYWVDGTQHVISLEDVGLADSQWKNITVQVTGETYSLYVGCDLTDSFTLDEPFY EQLKTEKSRMYVAKGPARESHFRGLLQNVYLVFENSVEDLLSKKGCQQSQGAEANAISEN TETLHLSPPVSMEHVGRSEAKGPEVCEHSCEELGSLIRELSGLHVIVNQLHENLRKVSND NRFLWELIGGPPKTRNMSACLQDGRFFAENETWVVDSCTKCTCKKFKTVCHQISCPPATC ADPSFVDGECCPSCFHADGEDGWSPWAEWTECSATCGPGTQQRGRSCDVTSNTCLGPSIQ TRSCSLGKCDHRIRQDGGWSHWSPWSSCSVTCGVGNVTRIRLCNSPVPQMGGRSCKGSGR ETKTCQGPPCPVDGRWSPWSPWSACTVTCAGGIRERTRICNSPEPQHGGKDCVGDVTEHQ MCNRRSCPADGCLSNPCFPGAECRSFPDGSWSCGSCPLGFLGNGTHCEDLDECAVVTDVC FTTSKAHRCVNTNPGFHCLPCPPRYKGSQPFGVGLEAARTEKQLCEPEDPCKDKSHNCHR HAECIYLGHFSDPMYKCACQTGYAGDGLICGEDSDLDGWPNKNLVCATNATYHCIKDNCP LLPNSGQEDFDKDGIGDACDDDDDNDGVSDEKDNCQLVFNPRQFDYDKDEVGDRCDNCPY EHNLAQIDTDSNGEGDACSADIDGDDVFNERDNCPYVYNTDQRDTDGDGVGDHCDNCPLV HNPDQTDVDNDLVGDQCDNNEDIDEDGHQNNQDNCPYISNANQADHDHDGKGDACDSDDD NDGVPDDRDNCRLVANSDQEDSDGDGRGDACKDDFDNDNIPDIDDVCPENHAISETDFRN FQMVHLDPKGTTQIDPNWVIRHQGKELVQTANSDPGIAVGFDEFGSVDFSGTFYVNTDRD DDYAGFVFGYQSSSRFYVVMWKQVTQTYWEDQPTRAYGYSGVSLKVVNSTTGTGEHLRNA LWHTGNTEGQVRTLWHDPKNIGWKDYTAYRWHLTHRPKTGYIRVLVHEGKQVMADSGPIY DQTYAGGRLGLFVFSQEMVYFSDLKYECRDV NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atgctgtggccgctgctgctgctagccttatggccctggtacggtgctcgggccggcgac caggacgaggacaccgcctttgacctcttcagaatcagcagcatcaaccgcaagaccatc ggggccaagcagttccggggcccggaccccagcgtgcccgcctaccgcttcgtgcgcttt gactacatccctccggtgagcgcggagcacctgggtcggatcgccgaggccatgcggcgg aacgagggctttttcctgacggccagcctgaagcaggaccgcaagtccaggggcaccctg ctggcgctggagggcccaggcgccacacacaggcagttcgagatcgtgtccaacggcccc gccgacaccctggacctcacgtactgggtggacggcacccagcacgtcatctccctggag gacgtgggcctggctgattcccagtggaagaacatcactgtgcaggtgaccggagagacc tacagcctctacgtgggctgcgacctgacggacagcttcacgctggacgagcccttttac gagcagctgaagacggagaagagcaggatgtacgtggccaagggccccgcccgagagagc cacttccggggtttgctgcagaacgtctacttagtgttcgaaaactctgtggaagatctt ctgagcaagaaaggctgtcagcaaagccagggagccgaagccaacgccatcagcgagaac acggagacgctgcacctgagccccccagtctccatggagcacgtgggccggagcgaggcc aagggcccggaggtgtgcgagcactcctgcgaggagctgggcagcttgatccgggagctg tcggggctgcacgtcatcgtgaaccagctccacgagaacctgcgcaaagtgtcaaatgac aaccggtttctctgggagctcattggaggaccccccaagaccaggaacatgtccgcctgc ttgcaggatggcaggttctttgcggagaatgaaacctgggtggtggacagctgcaccaag tgcacctgcaagaaatttaaaaccgtttgccaccagatcagctgccctcccgccacgtgc gccgacccgtcgtttgtggacggcgagtgctgtccctcctgcttccacgcagacggcgag gacggctggtccccgtgggcggagtggacggagtgctctgccacctgcgggcctggcacc cagcagagggggcggtcctgcgacgtcaccagtaacacctgcctggggccatccatccag acgcggtcgtgcagcctgggcaagtgcgaccaccgcatccggcaggatggtggctggagt cactggtcgccgtggtcctcctgttccgtgacctgtggggtcggcaatgtcacccgcatc cggctctgcaactcgccagtgccacagatgggcgggcggagctgcaagggcagcggccgc gagaccaagacctgccagggcccgccctgcccggtcgacggtcggtggagcccctggtcc ccatggtcggcctgcacggtcacctgtgccggagggatccgggagcggacgcgcatctgt aacagcccggagccgcagcacggagggaaggactgcgtcggcgacgtcacggagcatcag atgtgtaacaggaggagctgccccgcagacggctgcttgtccaacccctgcttccccgga gccgagtgccgcagcttccccgacgggtcctggtcctgcggctcttgcccgctgggcttc ctgggcaacggcacccactgcgaggacctggacgagtgtgctgtggtcaccgacgtgtgc ttcacgaccagcaaggcgcaccgttgcgtcaacaccaaccccggcttccactgcctgccc tgccccccgcgctacaaggggagccagcccttcggcgtcggcctggaggcggccaggacg gagaagcagctgtgcgagcctgaggacccctgcaaggacaagagccacaactgtcacagg cacgcggagtgcatctacctgggccacttcagcgaccccatgtacaagtgcgcgtgccag acgggctacgcgggcgacgggctcatctgcggggaggactcagacctggatggctggccc aacaagaacctggtctgcgccaccaacgccacctaccactgcatcaaggacaactgcccc ctcctgcctaactctgggcaagaagactttgacaaggacggcatcggggacgcctgtgac gatgacgatgacaacgacggcgtcagcgatgagaaggacaactgccaactcgtcttcaac ccacggcagtttgactacgacaaagacgaggttggggaccgctgtgacaactgcccctac gagcacaacctggcgcagatcgacacggacagcaacggggagggcgacgcctgctccgcg gacatcgatggggatgatgtcttcaatgagcgagacaactgtccctacgtctacaacact gaccagagggacaccgacggggacggcgtgggcgatcactgcgacaactgccccctggtg cacaacccagaccagaccgacgtagacaacgacctcgtgggtgaccagtgtgacaacaac gaggacattgacgaggacggacaccaaaacaaccaggacaactgcccctacatctccaac gccaaccaggccgaccacgaccacgacggcaagggggacgcctgtgactcggacgacgac aacgacggcgtcccagacgacagggacaactgccggcttgtggccaactccgaccaggag gactcagacggcgatgggcgtggtgatgcctgcaaagacgactttgacaacgacaacatc cctgatattgatgacgtgtgtcctgagaaccacgccatcagtgagacggacttccggaac ttccagatggtccacctggaccccaagggcaccactcagatcgatcccaactgggtcatt cgccatcaaggcaaagagctggtgcagacggccaactccgaccctggcatcgctgttggt ttcgatgagtttgggtcagtcgacttcagcggcacattctacgtcaacacggaccgggat gacgactatgctggcttcgtctttggctaccagtccagcagccgcttctacgtggtgatg tggaagcaggtcactcagacgtactgggaagaccagcccacccgggcatacggctactca ggggtgtccctcaaagtggtgaactccaccacggggacaggcgagcacctgaggaatgcc ctgtggcacacggggaacacagagggacaggttcgcacgttatggcatgaccccaaaaat attggctggaaggactacactgcctacaggtggcatctgacccacagacctaagacaggt tacataagagtcttagtgcatgaaggaaaacaggtcatggcggactcaggacctatctat gaccaaacctacgccggtgggcggctgggtctgtttgtcttctctcaagaaatggtctac ttctcggacctgaaatatgaatgcagagatgtctga

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