Phocoena sinus (vaquita): 116763788
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Entry
116763788 CDS
T07759
Symbol
SMAP1
Name
(RefSeq) stromal membrane-associated protein 1 isoform X1
KO
K12486
stromal membrane-associated protein
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116763788 (SMAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116763788 (SMAP1)
Membrane trafficking [BR:
psiu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
116763788 (SMAP1)
Endosome - Golgi transport
Arf GTPase associated proteins
116763788 (SMAP1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ArfGap
SR-25
EMC3_TMCO1
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
116763788
NCBI-ProteinID:
XP_032507802
Ensembl:
ENSPSNG00000020734
UniProt:
A0A8C9CRZ5
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Position
12:complement(82931124..83082862)
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AA seq
472 aa
AA seq
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MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
RNLGVHISRVKSVNLDQWTPEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
DKYEKKKYYDKNAIAITNISSSDAPLQPLVSSPSLQAAVEKNKLEKEKEKKKEEKKREKE
PEKPAKPLTTEKLQKKEDQQLEPKKSTSPKKAAEPTVDLLGLDGPAEVPVTNGNTATGQA
LNDDLDIFGPMISNPLPGTVLPPAQGTPSVPAVAALSAVTSGDLDLFTEQTTKSEEVAKK
QLSKDSILSLYGTGTTQQQSAPGVFMGPTNIPFPSQAPAAFQGFPSMGGPVPAAPGLAGS
VMGPSAGVMVGVPLPNGFMGNAQTGVMPLPQSVVGPPGGMVGHAGAAQSKFGLPPAQQPP
WNLSQVNQQMAGLSLGGASPAAGFSQPPSTTAGAAGWSGASSGQTLSTQLWK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcgctcgtgccgggagaaggcgcagaagctgaacgagcagcaccagctcatc
ctgtccaagctgctgagggaggaagacaacaagtactgcgccgactgcgaggctaaaggt
cctcgatgggcttcctggaatattggtgtgtttatttgcatcagatgtgctggcatccat
aggaatcttggggttcatatatccagggtcaagtcagtcaacctagaccaatggacaccg
gaacagatccagtgcatgcaagatatgggaaatactaaagcaagactactatatgaagcc
aatcttccagagaactttcgaagaccacagacagatcaagcagtggaatttttcatcaga
gataaatatgaaaagaagaaatactacgacaaaaatgctatagctattacaaatatttcc
tcctctgatgctcctcttcagcctttggtatcctctccttctctacaagctgctgttgag
aagaacaaattggagaaagaaaaagaaaaaaaaaaggaagagaaaaagagagaaaaggag
ccagaaaagcctgcaaaacctcttacaactgaaaagctgcagaagaaagaagatcagcaa
ttggagcctaaaaaaagtaccagccctaaaaaagctgcagagcccactgttgatctgtta
ggactcgacggccctgccgaggtgccagtgactaatgggaacacagccacgggacaggcc
ttgaacgatgatctggacatctttggaccgatgatttctaatcccttacctggaactgtc
ctgccgccagctcaggggacgccctctgtaccagcagttgccgctctgtctgcagtgaca
tctggggatctggatctattcactgagcaaactactaagtcagaagaggtggccaagaaa
cagctctccaaagactccatcttgtctctgtatggcacggggaccacccagcagcagagt
gctcctggtgtgtttatgggacccacaaatataccatttccctcacaagcaccggctgca
tttcaaggcttcccgtccatgggcgggcctgtgcctgcagctcctggccttgcgggaagc
gtgatggggccgagcgcgggcgtgatggtgggcgtgcccctgcccaacggcttcatggga
aacgcacagactggggtgatgccacttccgcagagtgtggtcggccccccaggagggatg
gtgggacacgcgggtgcagcccagagtaagtttggcctgccgccagctcagcagccccca
tggaacctctcccaggtgaaccagcagatggctggcctgagcctgggcggcgcaagcccc
gcagcaggcttcagccagccccccagcaccacggcgggggcagcggggtggtcgggggcc
tcgtcaggtcagacgctcagcacgcagctgtggaagtga
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