KEGG   Phocoena sinus (vaquita): 116763905
Entry
116763905         CDS       T07759                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03010  Ribosome
psiu04120  Ubiquitin mediated proteolysis
psiu04137  Mitophagy - animal
psiu04140  Autophagy - animal
psiu05012  Parkinson disease
psiu05022  Pathways of neurodegeneration - multiple diseases
psiu05167  Kaposi sarcoma-associated herpesvirus infection
psiu05171  Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    116763905
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    116763905
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    116763905
   04137 Mitophagy - animal
    116763905
 09160 Human Diseases
  09172 Infectious disease: viral
   05171 Coronavirus disease - COVID-19
    116763905
   05167 Kaposi sarcoma-associated herpesvirus infection
    116763905
  09164 Neurodegenerative disease
   05012 Parkinson disease
    116763905
   05022 Pathways of neurodegeneration - multiple diseases
    116763905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:psiu03011]
    116763905
   04121 Ubiquitin system [BR:psiu04121]
    116763905
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psiu04147]
    116763905
Ribosome [BR:psiu03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    116763905
  Archaea
    116763905
Ubiquitin system [BR:psiu04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   116763905
Exosome [BR:psiu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116763905
  Exosomal proteins of colorectal cancer cells
   116763905
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 FAD_binding_6 OTU1_UBXL GCP6_N
Other DBs
NCBI-GeneID: 116763905
NCBI-ProteinID: XP_032507910
Ensembl: ENSPSNG00000005306
UniProt: A0A8C9B9M2
LinkDB
Position
13:complement(34414440..34414947)
AA seq 155 aa
MQIFVKTLTGKTVTLEVEPSDTIENVKAKIQDEEGIPPAQQRLSFAGKQLEDGRTLSEHN
TEKESILHLVLRLRGGAKKRKKSYTTPKKNKRKRKKVKLAVLKYHKVEENGKISRLLREC
PSDERGAGVFMASHLDRHYCGKCCLTYCFNKPEDN
NT seq 468 nt   +upstreamnt  +downstreamnt
atgcagattttcgtgaagaccctgacggggaagaccgtcactctcgaggtcgaaccctcg
gatacgatagaaaacgtaaaggccaagatccaggacgaggaaggaattcctcctgcccag
caaagactgagttttgctggcaagcaactggaagatggacgtactttgtctgaacacaac
actgaaaaggagtccatccttcatcttgtgttgagacttcgtggtggcgctaagaaaagg
aagaagtcttacaccactcccaagaagaacaagcgtaagagaaagaaggttaagctggct
gtcctgaaataccataaggtggaggagaatggcaaaatcagtcgccttcttcgggagtgc
ccttcagatgaacgtggtgctggagtttttatggccagccaccttgacagacattattgt
ggtaaatgttgtctgacctattgtttcaacaaaccagaagacaactga

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