Phocoena sinus (vaquita): 116763992
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Entry
116763992 CDS
T07759
Symbol
PCARE
Name
(RefSeq) photoreceptor cilium actin regulator
KO
K24165
photoreceptor cilium actin regulator
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psiu03037
]
116763992 (PCARE)
04812 Cytoskeleton proteins [BR:
psiu04812
]
116763992 (PCARE)
Cilium and associated proteins [BR:
psiu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116763992 (PCARE)
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
116763992 (PCARE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retinal
Motif
Other DBs
NCBI-GeneID:
116763992
NCBI-ProteinID:
XP_032508126
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Position
13:complement(22862664..22871266)
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AA seq
1298 aa
AA seq
DB search
MGCTPSHSDIVNSVAKSGIQFFKKPKATLPGCQGPSERCSIPLLVQNSTCYDSGGGSSQG
QRPEEQQSPRWIQSVAESLCQLTRDPTSGKRKDMEGLIPETKTSPSQPNKSQSYVATDIP
FKGQSSHGSQGAAFSGEESEESNTQETSKWEKRPKCHRSSKQGHDCQTILPAPESEDKVD
FPEPLVKAHQRAYTYLHTCLSKYEAVMSITHCATQTQELLQPMVGFLLLCFDEVNQLLGE
ISKDGEELLQEVKEDLAWPLKKREPREQPDLLQQLLQYTVSKLQALSGTVASLSDSLLEG
SGRYFHGAAGHLGNKLCKKKGADEHLLRVLGHLESLASGHGDPEVQGLPLCSEDSGIGAD
NEYVQLADKLGKRASWDFVLEPAEWRPAIPPTVEAKLSRHTWQQSPLWMGSARPQDCPLS
RPLTAKVQPAVQGGWGSPWPSSTGPENTASRPWGLGQSAPCDSPGIGISREAHFPKGSRL
MDTPTLSGGEDSSPEAVEDKESCLSPRAGQGSASHARPRSSPAGAESLFQPHPRRLRSPQ
DEEMILKMKEAISERIKFVPVPSEHQEWIEEEERTMVPPRPNTASDSRKAPSRQRRSQSE
GCLKSHVEDPTLQELRRVQRDLSQRLEALCTRDTRRQGHSQKQVLQPRATALRPDHYCKV
TPSSTISKLKASLTKNFSILPSQSTLQKCCPHPEGEQPWQGKAEGLPNVMPSGERASEAP
RARDWNIKSCPTRTSVKKLIETFSPTEGLRTLGDSKDSGPSPCPRKWGVPTMPPRFPIYR
GLAPLYPKPRISPAAGGESLRMGPGWRPLAPTFPPLLTAEASKSEDLNCETEENPEHLPP
PPLEILMDKSFTSLEPPENSNLAESSLEGTHVPGLGGAGPARRTWASAKLRATMSPSDLL
PSKSTATLARARSTEPGRSKSGCNPGKLALDLSHPPAASGNPEVQGSRAQSQARADRATG
LSKHPRKVIHWHHSSHTSGQDRTSEPSLARPMRGPHSPEAPRQNQDRSPVLVRKASPTRA
HWTPRVDKRHSSVPSTHRPAQPSVPCVHRSPSPPLSPPVSPRTLSPPTVKKRASPPPQHK
LSTPPSASPPAQHKVSSPPAQCTEASSPASGPSPSPPASPSQGPKETRDSEDSRAATAKA
PGNTCSIFCPATSSLFEAKSPFSTVPQLTPPSLPPEAGGPCGNPTGCWRSSAGPRLRADS
QRGTALCALNPQPFIRRTASDCQPGIRLRLPVPGTTSDACESRLGQSSSSEESPKDTEPW
NSPCAPEPPPELCVLGHGLQREASASHAQDKRQQKEVA
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgggatgtacaccttcccacagtgatattgttaacagcgttgctaagagtggcatccag
ttttttaaaaagcccaaagcaactctgccaggatgtcaggggcccagtgaaagatgctcc
atccctttgctggttcaaaactccacctgctatgactctggagggggctcgtcccaggga
cagaggccagaagagcagcaaagtcccaggtggatccaatccgtggctgaaagtctttgt
cagctcaccagagatcccacttcgggcaaaaggaaagatatggaaggactgatcccagaa
accaaaacctccccatcccagccgaacaaatcacaaagctacgtggctacagacattcca
ttcaaaggacagagttcccatggatcacaaggggcggccttttctggggaagagagtgag
gaaagtaatacccaggagacttccaaatgggaaaagaggccaaaatgtcacaggtcgagc
aaacagggccatgactgccaaaccatccttcctgcccccgagtctgaagacaaagtagac
ttccctgagcccctggtgaaggcccaccagcgtgcttacacctatctgcacacctgcctc
tccaaatacgaagcagttatgagcatcacccattgcgccacgcagacccaggagctgctg
cagcccatggtcggcttcctgttgctgtgttttgatgaggtcaatcagctcttaggggag
atctccaaggatggagaagagctcctccaggaagttaaggaggatctggcttggcctttg
aagaaaagagagccccgggagcagccagatctcttgcagcagcttctgcagtacacagtt
agcaagctgcaggcgctcagcggcacggtggcctcgctctctgacagcctcctggagggc
tccggccgctacttccacggcgccgcgggccacctgggaaacaagctgtgcaagaagaag
ggtgcggatgagcacctcctcagggttctggggcacctggagagcttagcgagtggccac
ggtgaccctgaagtgcagggcctacccttgtgctctgaggacagtggcatcggtgctgac
aatgagtatgtgcagctggcagacaaactgggcaagcgagccagctgggacttcgtgctg
gagcctgcagagtggaggccagcaattccacccacagtggaggccaagctgtccagacat
acctggcagcaaagcccactctggatgggttcagccagaccccaggactgcccgctctca
aggcctcttacagcaaaggttcagccagcagtgcagggtggatgggggagcccctggccc
tccagcacaggcccagaaaatactgcctccaggccttgggggctgggccaaagcgctccg
tgtgattcccctgggatcgggatctccagggaagcacactttcctaaaggctccaggttg
atggacactccgaccctcagtggaggtgaggacagcagcccagaggcggtggaagacaaa
gagagctgcctgagtccgcgtgcggggcagggaagcgcttcccatgcaaggcctcggtct
tcgcctgccggtgccgaaagcctatttcagccacacccccggaggcttaggagcccccag
gacgaggaaatgattctgaagatgaaggaagcaatcagtgaaaggatcaagtttgtcccc
gtgccctctgagcaccaggaatggattgaggaagaggagagaaccatggtgcccccaaga
ccgaacacggccagcgacagcaggaaggccccctcaaggcaaaggaggtcccaatctgag
gggtgtctgaagagccacgtggaggaccccaccctccaggagctgcggagggtccagaga
gacctcagccagaggctggaggcgctttgcacccgggacacccgacggcaggggcacagc
cagaagcaggttctgcaacccagggcaacagcgctgaggcctgaccactactgcaaggtc
accccaagcagcaccatcagcaagttgaaggcgtccctcaccaagaacttcagcattttg
ccaagtcagagcaccttgcagaaatgctgtccccaccctgagggagaacagccctggcag
ggaaaagctgaggggcttccaaatgtcatgccatcaggtgagagggccagtgaggctccc
agggcccgggactggaacatcaagagctgtcctaccagaacatcggtcaagaaactcatt
gaaactttcagtcccaccgagggtctaaggacactgggggattccaaggactctgggccg
agcccctgccccaggaagtggggggtccccaccatgcctcccagattccccatttacagg
ggacttgcccctttgtatccaaagcctcgaatttctccagcagcaggtggagaatctctc
aggatgggcccaggctggaggccccttgctcccacctttccccctctgctcacagcagaa
gcgtccaagagtgaggacctcaactgtgaaacagaggagaacccagagcatctccctcca
ccgcctctggaaatcctgatggacaaatcattcacttccctggagcccccagaaaacagc
aatctagcagagagctcccttgaagggacccacgtgccagggctgggaggggctggcccc
gcccggagaacgtgggcttccgcaaagctaagagccaccatgagcccctctgacctgctg
cccagcaaaagcacggccaccctcgccagggcccgcagcacagaaccagggagaagcaag
agcggctgcaatcccggaaagctcgccttggacctcagtcacccaccagcagccagcggg
aacccagaggtgcagggcagcagggctcagagtcaggcacgagcggacagggccacaggc
ctctccaagcatccccggaaggtcatccactggcaccactccagccacacgtccgggcag
gacaggacctcggaacccagcctggccaggccaatgcgaggcccacattctcccgaggcc
ccgaggcagaaccaagacagaagccccgtgctggtcaggaaggcctctcccacaagggca
cactggacacccagagtggacaagaggcactcaagcgtgccctccactcacagacctgcc
cagccaagtgtgccctgtgtgcacaggtcccccagcccaccgctcagccctccagtgagc
cccaggacgctaagccccccaacagtgaagaaacgagcctcccctcccccccagcacaaa
ctgtccacccctccctcggcaagcccacccgctcagcacaaggtctccagcccccctgcc
cagtgcacagaagccagttcccctgcctctggcccctccccatctcccccagcgtctccc
agtcaggggcccaaggaaacaagagattctgaagacagtcgggcagccacggccaaagca
cctgggaacacatgttccattttctgtccagccacctcctctctgttcgaagctaagtca
ccattctcaacagtaccccagctcaccccaccatcgctgccacctgaagctggaggtcct
tgtgggaacccgacaggatgctggaggagcagcgcagggccacgactgagggcggactca
cagcgagggacagccctgtgtgccctcaaccctcagcctttcatcagaaggacagcttct
gactgccagccgggcatccgccttcgcctgcctgtcccgggcaccaccagcgacgcttgt
gaatcccggcttggccagagcagcagcagcgaggagagccccaaggacacagagccatgg
aacagtccctgtgccccagaaccgcccccagagctctgtgtgctgggccacgggctgcag
cgggaggccagcgccagccatgcccaggacaagcgccagcagaaggaggtggcctga
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