Phocoena sinus (vaquita): 116764104
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Entry
116764104 CDS
T07759
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psiu03021
]
116764104 (AFF3)
Transcription machinery [BR:
psiu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
116764104 (AFF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
116764104
NCBI-ProteinID:
XP_032508230
Ensembl:
ENSPSNG00000007712
LinkDB
All DBs
Position
13:complement(83454878..84073369)
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AA seq
1281 aa
AA seq
DB search
MDSFDLALLQEWDLESLCVCEPDRNVLRRKERERRNQETQQDDGAFNSSYSLFSEPYKTN
KGDELSNRLQNTLGNYDEMKDFLTDRSNQSHLVGVPKPGVPQAPVNKIDEHFVADSRAQT
QPASVCSTTSSAPAVVPGQQSKRGTVGWQKAGHPPSDGQQRASKHGHRTLDLNRPAHPEN
HNKNPNPCVLSPSSSSASSSSSSKSAQQGSLRTLLGDGVGRQQPRTKQVCNVEVGLQTQD
RPPAMGAKHSGSGHCVQNFPPSLASKPSLVQQKPTAYVRPMDGQDQAPNESPKLKSSTET
SVHCASYRGASAAKPESARTKAKLAKFSIPKQGEESRSGETNSCVEEIIREMTWLPPLSA
IPAPGKVEPSKFPFPNKDSQLTSSGHSNPKKGDAEPGSPDNGTSNTSSLGWLSPFTDKGN
DALRGMLEDDLKLSSDEEENEQQAAQRTALHALSDSAGLPQANCRASVPSSKGSSSGSSS
SGSSSSSDSESSSGSDSETESSSSESEGSKPPHYSSPEAEPASSNKWQLDKWLNKVNPHK
PPILIQNESHGPEGNQYYTPVKDEAPDCGKLPDNVCPTSLRDKDIKSACKEEQRPRTANK
APGSKGVKQKSPPAAVAVAVTAAAPPPAVAGAPAESAPAPARRSAGKKPTRRTERTSAGD
NSHRPEEPAAADALGASAGIPPEPPKPRPCGNSRTSHRKELRSAVTGEKRRTRGLSRIVP
KSKEFIETESSSSSSSADSDLESEQEDYPLSKATAASGNDPRLKEAASSSSGGGPRAPVG
SINARTTSDIAKELEEQFYTLVPFGRNELLSPLKDSDEVRSLWVKIDLTLLSRIPEHLPQ
EPGVLSAPAAKDTESAPPSHASDAPAEKALPKSKRKRKCDSEDDCREIRKAQGEKESSSR
LTASASSTLSANHCNVNVNSLAIPINKNEKMLRSPTSPLSDASKHKYPGEDLTSPSRSNS
NGLFTSASSTKKHKAENQLQTHGGDLTKAAHSNSENVLHKSRPQTEPWSPGSNGHRDCKR
QKLIFDDMPRSADYFMQEAKRMKHKADAMVEKFGKALNYAEAALSFIECGNAMEQGPMES
KSPYTMYSETVELIRYAMRLKTHSGPNATPEDKQLAALCYRCLALLYWRMFRLKRDHAVK
YSKALIDYFKNSSKAAQAPSPWGASGKSTGTPSPMSPNPSPTSSVGSQGSLSNGNALSPS
TIVSIPQRIHQMAANHVSITNSILHSYDYWEMADNLAKENREFFNDLDLLMGPVTLHSSM
EHLVQYSQQGLHWLRNSTHLT
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgacttagccctgctccaggaatgggacctcgagtcgctgtgtgtctgt
gaaccagacaggaacgtgttacggaggaaagaacgagaaagaagaaatcaggaaacccag
caggatgatggcgcgtttaattccagttactccctctttagtgaaccctacaagactaac
aagggggatgagctctccaaccggctccagaacactttaggcaattacgatgaaatgaaa
gactttttaacggatagatcgaatcagagtcatctcgttggcgttcccaaacctggggtt
cctcaggctcccgtgaacaagattgacgagcattttgttgcagattcgagagcccagacc
cagcctgcatccgtctgcagcaccacatcctccgccccagcagtggtccctgggcagcag
agtaagaggggcactgtgggctggcagaaggccgggcacccaccgtccgatggccaacag
agagcaagtaagcacggacacaggacgcttgatttgaacagacctgctcacccagagaac
cataataaaaaccctaacccctgtgtcttgagcccctcatcctcatctgcctcttcttct
tcttcttccaaatcagcacaacagggctctctcaggaccttgctcggagatggtgttggc
agacagcagccgcggaccaaacaggtgtgcaacgtcgaggtgggtcttcagacccaggac
aggccacctgctatgggagccaagcacagcggcagtggccactgtgttcagaactttcct
ccatccctggcttcaaagcctagcctcgtccagcagaaaccgaccgcctacgtgcggccg
atggatggccaagatcaggctcccaatgagtctccgaagctgaagtcgtccacagagacc
agcgtgcactgtgcgtcatacaggggagcctcagccgcgaagccagagtccgccagaacc
aaggccaagcttgccaagttcagcatccccaaacaaggagaggagagtagatctggagaa
accaacagctgtgttgaagaaataattcgggagatgacctggcttccaccactttcagct
attccagcacctggaaaagtggaaccgagcaaatttccatttccaaataaggactctcag
ctcacttcctcgggacacagtaatccaaagaaaggtgatgctgagccagggagtccagac
aatggcacgtcgaatacatcctctctgggatggttatccccatttactgataagggaaat
gatgcactgagaggaatgctagaagatgaccttaagctaagtagcgatgaagaggagaat
gaacagcaggcagcccagagaacggctctccacgctctgtctgacagtgccggcctcccg
caggccaactgcagggcctccgtgccctccagcaagggcagcagcagcggcagcagcagc
agcggcagcagttcctccagcgactcggagagcagctcgggatctgactcagagaccgag
agcagctccagcgagagtgagggcagcaagcctccccactactccagccctgaggccgaa
ccagcgtcctctaacaagtggcagctggataaatggctaaacaaagttaatccccacaag
cctcctatcctgatccaaaatgaaagccacgggccggagggcaatcaatactacaccccg
gtgaaggacgaagcgccagactgcgggaagcttcccgacaacgtctgcccgaccagcctg
agagacaaggacatcaagagcgcctgcaaggaggagcagaggccgaggaccgcgaacaag
gccccggggagcaaaggggtgaagcagaagtccccgcccgcggccgtggccgtggccgtg
accgccgccgccccgccgcccgcggtggccggtgcgcccgccgagagcgcgcccgcgcct
gcccggaggtccgcgggcaagaaacccacgcggcgcaccgagaggacctccgccggcgac
aatagccaccggcccgaggagcccgcagccgcggacgcgctgggggcgagcgcggggatc
cccccggagccccccaagccccggccctgcggcaacagtaggaccagccaccgcaaggag
ctgcgctcggccgtaaccggcgagaagcgccgcacgcgggggctgagccggatcgtcccc
aaatccaaggagttcatcgagaccgagtcgtcctcgtcgtcctcctccgcggactcggac
ctggagtcagagcaagaggactaccctctgtccaaggccactgccgcctccgggaacgac
ccgaggctgaaggaggctgccagcagcagcagcggtggcggcccacgggcccctgtgggc
tctatcaacgccaggaccaccagcgacattgccaaggagctggaagagcagttctacaca
ctggtccccttcggccgcaatgaacttctctccccgttgaaggacagtgacgaggtcagg
tcactctgggtcaaaattgacctgaccctcctgtccaggatcccagaacacctgccccag
gagccgggggtcttgagcgctcccgcggccaaggacactgaaagcgccccgccgagccac
gcatccgatgcgcccgcagaaaaggctttgccaaaatccaagaggaaacgcaagtgtgac
agcgaagatgactgccgggagatcaggaaggctcagggagagaaggagagctcttcacga
ctcactgcgtccgccagcagtactttgtccgcaaaccattgcaacgtgaacgtcaacagc
ttggcaatcccaataaataaaaatgaaaaaatgctccgctcacccacctcacccctctcc
gacgcatctaaacacaaataccccggcgaggacctgacgtcccccagcagatccaacagc
aacggtttgttcacctccgcctcgtccaccaaaaagcataaggctgagaaccagctgcag
acccatggtggagacctcacgaaagcggctcacagcaattccgaaaacgttctccacaag
tcacggccacagacagagccatggtctccaggctccaacggccacagggactgcaagagg
cagaaactcatcttcgatgacatgccacgcagtgcagattattttatgcaagaagctaag
cgaatgaagcataaagcagatgcaatggtggagaagtttggaaaggctctgaactatgct
gaagcagccttgtcattcattgagtgtggaaatgcaatggagcagggcccaatggaatcc
aaatctccatatacaatgtattcagaaacagttgagctcatcaggtatgctatgagacta
aaaacccactcaggccccaatgccacaccagaggataaacagctggctgcattatgttac
cgatgcctggctctcctgtactggcggatgtttcgactcaaaagggatcacgctgtaaag
tattcaaaagcacttatcgactatttcaagaattcatctaaagctgcccaagccccatct
ccatggggggccagtggaaagagcactggcaccccatcccccatgtctcccaacccctcc
cccaccagctccgtgggatctcaggggagcctctccaatgggaacgccctgtccccatca
accatcgtcagcatcccacagcgcatccaccagatggcagccaaccacgtcagcatcacc
aacagcattctccacagctatgactactgggagatggcggacaacctggccaaggagaac
agagaattcttcaatgacctggacctgctcatggggccagtcaccctgcacagcagcatg
gagcacctggtccagtactcccagcagggcctgcactggctgcggaacagcacccacctg
acatag
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