Phocoena sinus (vaquita): 116764204
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Entry
116764204 CDS
T07759
Symbol
DHX57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57 isoform X1
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
psiu03012
]
116764204 (DHX57)
Enzymes [BR:
psiu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116764204 (DHX57)
Translation factors [BR:
psiu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
116764204 (DHX57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
RWD
Helicase_C
DEAD
HA2_C
zf-CCCH_4
zf-CCCH
HA2_N
zf_CCCH_4
Torus
zf-CCCH_2
nSTAND3
AAA_22
AAA_19
NPHP3_N
UBA
AAA_14
NB-ARC
Rad17
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
116764204
NCBI-ProteinID:
XP_032508463
Ensembl:
ENSPSNG00000004513
LinkDB
All DBs
Position
13:complement(31263387..31320453)
Genome browser
AA seq
1382 aa
AA seq
DB search
MSSSVRRKGKPGKGGGKGSSRGGRGGRSHASKSHGGGSGGGGIGGNRKASSRIWDDGDDF
CIFSESRRSSRPSNSSVRKGDAHPKWKPEAKAPLQTLHMTSENQEKVKALLRDLQEQDAD
AGSERGVSGEEEDDESDYDDEQYWSAGREASLVPDSDPLECAGSGLVEPHPEFTVSAFAV
QKLSRYGFNTEHCQVALRICNGDLGASLEHLLTQCFSETFGERMKISEAVARISLDECVE
QRQEEAFALKSICGEKFIERIQNRVWTIGLELGYLTSKFCKSKQKESTKNIQETSLEICK
FYLKGSCKFGSKCKFKHEVSPNQIVGRAERSVDDSHLNADEDASFLYELEIRFSKDHKYP
YQAPLVAFYSTNENLPLACRLHISEFLYGKALTFAETSEPVVYSLITLLEEESEITKLLT
YTHHKYSVPPVNFLPVSSGTRINNPVCRKPVIPSNSFLSNQIPEVEKESEPEEETDEDEG
PTPVMVENESYVNLKKKISKRYDWQAKSVHAENVKICKQFRIKQASRQFQSILQERQLLP
AWEERENILKLLSKHQVLVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRIS
AISVAEHVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTALQGITHI
IVDEVHERTEESDFLLLVLKDIVLQRPTLQVILMSATLNAELFSEYFNSCPVITIPGRTF
PVDQFFLEDAIAVTRYVLQDGSPYARSMKQMSKEKLKARRSRTAFEEVEEDLRLSLHLHD
LDSTKDAVADQQLDFKQLLARYKGVSKSVIKTMSIMDFEKVNLELIEALLEWIVDGKHSY
PPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVVHPLHSSLSSEEQQAVFVKPPVG
VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRA
GRVASGVCFHLFTSHHFSHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLI
EPPHADSLRASKIRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPAL
TIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLRAYKGWQLSTKEGMRASYNY
CRQNFLSGRVLQEMASLKRQFTELLSDIGFVKEGLRAREIEKRAQGGGDGILDATGEEAN
SNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSEELKFVTKNDGYVHI
HPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLFGGGQVNVQLQRGEFTV
SLDDGWIRFAAASHQVAELVKELRCELDQLLQDKIKNPSIDLCTCPRGSRIISMIVKLVT
TQ
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttcagtaagaagaaaaggcaagccagggaaaggaggtggaaaggggtcttcc
agaggaggaagaggaggcagaagtcatgctagtaaatctcatgggggtggcagcggtggc
ggtggcattggtggcaatagaaaggcctcaagtagaatttgggatgatggcgatgacttt
tgtatcttcagtgaatcaaggcgttcatccagacctagtaacagtagcgtgagaaaaggg
gacgcacaccccaaatggaagcctgaagccaaagcgccccttcagactctacatatgact
tctgagaatcaagagaaagtgaaagctcttctccgagacctgcaagaacaggatgcagat
gctggatctgaaagaggtgtttctggggaggaagaagacgatgagtctgattatgatgat
gagcagtactggtcagctggacgagaagcttcccttgttcccgactcagatcctttggaa
tgtgctggttcaggcctggtggagcctcatccggaatttacagtctcagcgtttgcagtg
caaaaactttccaggtatggtttcaacaccgagcactgtcaggtagccctgagaatttgc
aatggagacttgggggcatcactggaacatctgctcacccagtgtttttcagagacattt
ggagagaggatgaagatctctgaggccgttgcgcgtataagcttggatgagtgtgtggag
cagcgacaggaagaggcctttgctctcaagtcaatctgtggagaaaaatttatagaaaga
attcagaacagagtctggaccattggattagaactggggtatttgacaagtaaattctgc
aaatccaagcaaaaggaaagtaccaaaaatatacaggagacgtcacttgaaatctgtaaa
ttttacctcaaaggaagttgcaaatttggatcaaagtgcaaattcaagcatgaagtgtcc
ccaaatcaaattgttggaagagcagaaagaagtgtagatgattcccatctaaatgctgac
gaagatgcatcttttttatacgaacttgaaattcgattttctaaagaccacaaatacccc
taccaagctccccttgtggcattttattccaccaatgagaatctacctctggcttgtcgt
ttacatatttctgagttcctttatggcaaggccttgacatttgcagaaacttcagaacct
gttgtatattctttgataacccttttagaggaagaatcagaaataaccaagttactaaca
tatacccatcacaagtacagtgtccctcctgtgaactttctgccagtatcctctgggacc
agaataaataatcctgtctgtcgtaaaccagtgattccaagtaattcgtttctttcaaat
caaattccagaagttgaaaaggaatcagagcctgaggaggagacagatgaggatgaaggt
cctacaccagttatggtggagaatgaaagctatgtcaaccttaagaaaaagatttccaaa
agatatgactggcaggcaaaatcagtacatgctgagaatgtcaaaatctgcaagcagttc
cgaataaaacaggcctccagacagttccagtcaattctgcaagaaagacaattactccct
gcttgggaagaaagagaaaacattcttaaactgttgagcaagcaccaagtgcttgttata
agtggtatgactggatgtgggaaaaccacacagattccacagtttattctggatgattct
ctgaacggaccacctgagaaggtggccaacatcatctgtacccaaccccgacgaatctct
gcgatctctgtcgccgaacacgttgctaaagaaagagcagagagagtgggtctgactgtg
ggataccagatccggttagaaagtgtcaagtcctcagccaccagactgttatactgcacc
acaggagtgctgctaagaaggctagagggggacacagccctacaaggaatcacccatatc
attgttgatgaagtccatgagaggacagaagaaagtgacttcttactgctagttttgaaa
gacattgtgttgcagagaccaactcttcaagttattctgatgagtgcaactttaaacgct
gagctcttttcagaatattttaattcctgcccagttatcactataccaggtcgtacattt
cctgttgatcaattttttctggaagatgcaattgccgtgacaaggtatgtgttgcaggat
gggagcccatatgcgcgctccatgaaacagatgtcaaaggagaagctcaaggcaaggcgc
agcagaaccgcgtttgaggaggtggaggaggacctgcgcctctccctgcacctccacgat
ctggattccaccaaagatgctgtggcagatcaacagttagattttaagcagctcctggcc
cgctataaaggggttagcaaatcagtcatcaaaacaatgtccattatggattttgaaaag
gttaatcttgaattaattgaagccttgttagagtggattgtggatggaaagcactcctac
cctccaggtgctatacttgtatttttaccgggactagcagaaatcaaaatgctttatgaa
cagctacagtctaattctctattcaacaacagacgtagtaatcgatgtgttgttcaccca
cttcattcatctttatccagtgaagagcagcaagctgtgtttgtaaagcctcctgtcggt
gtaactaagattataatttccacaaacatcgctgagacatccataaccatcgatgatgtt
gtctatgtcatcgattctgggaaaatgaaagaaaagagatatgatgccagcaaagggatg
gaaagtttagaggatacttttgtctctcaagccaatgccctgcaaagaaaaggtcgagca
ggtcgtgttgcatctggggtctgcttccatttattcaccagccatcacttcagtcaccag
cttctaaagcagcagctaccagaaatacaaagagtgccattggaacagctctgtctaaga
attaaaattttagagatgtttagcactcataatctccagtctgtgttctctcggctcatt
gaacccccgcacgctgattctctccgtgcctcaaaaatacggttacgagacctgggagca
ttaactccagatgaaaaactgacccctctagggtatcacttggcttctctgcctgtagat
gtgagaatcggaaaactaatgctgtttgggtctatcttccgctgtttggatcctgctctc
accattgctgcgagtttagcttttaagtctccttttgtatctccctgggataaaaaagag
gaagctaaccagaaaaagctagaatttgcatttgcaaacagtgattatctggcccttcta
cgagcatataagggatggcagctaagtacgaaagaaggtatgcgtgcaagttataattac
tgcagacaaaacttcttgtcaggaagagttcttcaggaaatggccagcctcaaacgacag
ttcacggaactgttatcggatataggctttgtaaaagagggactcagagcaagggaaatt
gagaaaagggcccaaggaggaggagatggtatcttggatgccacaggagaagaggctaac
tcaaatgctgagaaccccaagttgatatcagcaatgctgtgtgctgctctgtatccaaat
gtagtgcaggtgaaaagcccagaagggaaatttcagaagaccagtaccggagctgtcaga
atgcaaccgaaatcagaggaattgaagtttgtcaccaagaacgatggatatgtacacatt
cacccttcatcagtgaactaccaggtcagacactttgacagcccctacctgctgtaccat
gagaagatcaaaactagtcgggtgttcatccgagactgcagcatggtgtctgtgtacccg
ctggtcttgttcggaggaggacaagtgaatgtgcagctccaaaggggagagttcactgtc
tccttggatgacggttggatccgttttgcagcagcatcgcatcaggtggctgaattagta
aaggaacttcgctgcgaacttgaccagcttctccaggataagataaaaaacccaagcata
gatctgtgtacctgtcctcgagggtcacggatcatcagcatgattgtgaaacttgtcacc
acacaataa
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integrated database retrieval system
