Phocoena sinus (vaquita): 116764303
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Entry
116764303 CDS
T07759
Symbol
DYSF
Name
(RefSeq) dysferlin isoform X1
KO
K18261
dysferlin
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116764303 (DYSF)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116764303 (DYSF)
Membrane trafficking [BR:
psiu04131
]
Endosome - Lysosome transport
Others
Ferlins
116764303 (DYSF)
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116764303 (DYSF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
Pex24p
PTEN_C2
dsRBD2
Motif
Other DBs
NCBI-GeneID:
116764303
NCBI-ProteinID:
XP_032508691
Ensembl:
ENSPSNG00000008698
LinkDB
All DBs
Position
13:60983540..61206905
Genome browser
AA seq
2149 aa
AA seq
DB search
MLSCQLVRASNLPSVKKDRRSDPVASLTFRGVKKRTKVIKNSVNPVWNEGFEWDLKGVPL
DQGSELHVVVKDHETMGRNRFLGEANVPLREVLATPSLSASFNAPLLDTKKQPTGASLVL
QVSYTPLPGTMPTFPPSTPLEPSPTLPDMDMVAGGGQSRAETWSLLSDSTVDTRYSGKKW
LAPTDTGGEEDTEDQGLTGDEAEPFLDQSGAPGPGAPITPKKPPSHPPPYHPGARRKRST
PAPRKPLSDKSQDFQIRVQVIEGRQLPGVNIKPVVKVTAAGQTKRTRIHKGNSPLFNETL
FFNVFDSPAELFDEPIFITVVDSCSLRTDALIGEFRMDVGSIYREPRHAYLRKWLLLSDL
DDFSAGARGYLKVSLCVLGPGDEAPLERKDPSEDKEDIEGNLLRPTGVALRGAHFCLKVF
RAEDLPQMDDAVMDNVKQIFGFESNKKNLVDPFVEVSFAGKMLCSKILEKTANPQWNQSI
TVPAMFPSMCEKMRIRVIDWDRLTHNDIVATTYLSMSKISASGGEIEEESAGVVTPPPAT
DLDDHLGFLPTFGPCYVNLYGSPREFTGFPDPYAELNTGKGEGVAYRGRLLLSLETKLVE
HSEQKVEDLPADDILRVEKYLRRRKYSLFATFYSATMLQDVDDAVQFEVSIGNYGNKFDT
TCLPLASTTQYSRAVFDGCHYYYLPWGNVKPVVVLSSYWEDVSHRVEAQNQLLWIADQLE
AGLEQVHLALKAQHSAEDVDSLVAQLTDELIAGCSQPLGNVQETPSATHLDHYLYRLRTR
HLSQITEAAQALKLGHSELPTALEQAEDWLLRLRALADEPQNSLPDIVIWMLQGDKRVAY
QRVPTHEVLFSRRGTSYCGKNCGKLQTMFLKYPMEGVPGARMPVQIRVRLWFGLSVDEKE
FNQFAEGKLSVFAETYENQTKLALVGNWGTTGLTYPKFSDVTGKIKLPKESFRPSAGWAW
AGDWFVCPEKTLLHDTDAGHLSFVEEVFENQTRLPGGQWIYMSDNYTDVNGEKVLPKDDI
ECPLGWKWEDEEWSTDLNRAVDEQGWEYSITIPPDRKPRHWVPAEKMYYTHRRRRWVRLR
RRDLSQMEALKRHRQTEAEGEGWEYASLFGWKFRLEYRKTDAFRRRRWRRRMEPLEKTGP
AAVFALEGALGGVVDDRSEDSKSVSTLSFGVNRPTISCIFDYGNRYHLRCYLYQARDLPA
MDKDSFSDPYAIVSFMHQSQKTVVVKNTLNPTWDQTLIFYEIEIFGELASIAEQPASIVV
ELYDHDTYGADEFMGRCICQPSLERMPRLAWFPLTRGNQPAGELLASFELIQREKPAIHH
IPGFEVQDTSGILEELCAPAVFLQGLLQTSEDTDLPYPPPQREANIYMVPQNIKPVLQRT
AIEILAWGLRNMKSYQLASVSSPSLVVECGGQTVQSCVIKNLRKNPNFDICTLFMEVMLP
REELYCPPVVIKVIDNRQFGRRPVVGQCTIRSLESFLCDPYSEESPSPQGGPDDVSLLSP
GEDVLIDIDDKEPLIPIQLADGLSGFAPTNMASSPSSRHEEEFIDWWSKFFASIGEREKC
GSYLEKDFDTLKVYDTPLENVKDFEGLSDFCNTFKLYRGKTQEEMEDPSVIGEFKGLFKI
YPLPEDPAIPIPPRQFHQLASQGPQECLVRIYIIRAFGLQPKDPNGKCDPYIRISIGKKS
VSDQDSYIPCTLEPVFGKMFELTCTLPLEKDLKVTLYDYDLLSKDEKIGETVIDLENRLL
SKFGARCGLPQTYCISGPNQWRDQLHPSQLLHLFCQQRRVKAPVYRTDRVVFQDTEYTIE
EIEAGRVPNPHLGPVEERLALHVLRQQGLVPEHVESRPLYSPLQPDIEQGKLQMWIDLFP
KALGRPGPPFNITPRRARRFFLRCIIWNTKDVILDDLSITGEKMSDIYVKGWMVGFEEHK
QKTDVHYRSLGGEGNFNWRFIFPFDYLPAEQVCTVSKKDAFWRLDKTESKIPARAVFQIW
DNDKFSFDDFLGSLQLDLNRMPKPAKTAEKCSLDQLDDTFHPEWFVSLFEQKTVKGWWPC
VADQGEKKILAGKLEMTLEIVAESEHEERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSP
YKTMKFILWRRFRCAIILFVLLFILLLFLGIFVYSFPNYTAMKLVKPFS
NT seq
6450 nt
NT seq
+upstream
nt +downstream
nt
atgctgagctgccagctggtgagggccagcaacctccccagtgtgaagaaggaccggcgc
agcgacccggtcgccagcctgactttccgaggggtgaagaagagaaccaaagtcatcaag
aacagcgtgaaccccgtgtggaatgagggctttgagtgggacctcaagggtgtccccctg
gaccaaggctccgagcttcacgtggtggtcaaagaccatgagacgatggggaggaacagg
ttcctgggggaggccaatgtcccactccgggaggtccttgccacccccagtctgtctgcc
agcttcaatgccccgctgctggacaccaagaagcagcccacaggggcctcgctggtcctg
caggtgtcctacacgcctctccctggaaccatgcccacattcccaccttcgacgcctctg
gaaccctccccgactctgcctgacatggatatggtggctggtgggggacagagccgggct
gagacttggtccctgctcagtgacagcaccgtggacacaagatactctggaaagaagtgg
ctggcccccacggacacaggaggagaggaggatactgaggaccaggggctcacgggagac
gaggccgagccattcctggaccagagcggggctccgggcccgggggcccccatcacccca
aagaagccaccttcccatcctcccccctaccaccccggggcaagaaggaagagaagcacg
cccgcacccagaaagccgctgtcggacaaatcgcaggacttccagatcagggtccaggtg
atcgagggacgccagctgccgggagtgaacatcaagcctgtggtcaaggtcaccgcagct
gggcagaccaagcggacgcggatccacaagggaaatagccccctcttcaacgagactctt
ttcttcaatgtgtttgactctcccgcggagctgttcgacgaacccatctttatcacggtg
gtggactcctgttccctccggacagatgctctcattggggagttccggatggacgtgggc
agcatctaccgagagccccgacatgcttatctcaggaaatggctgctgctttcggacctg
gatgatttctctgctggagccagaggctacctgaaagtgagcctttgtgtgctggggcct
ggagacgaagccccgctggagagaaaagacccctctgaagacaaggaggacattgaaggc
aacctgctcaggccgaccggagtggccctccgcggagcgcacttctgcctgaaggtcttc
agggccgaggatttaccgcagatggatgatgccgtaatggacaatgtgaagcagatcttt
ggctttgagagtaacaagaagaacttggtggatcccttcgtggaagtcagctttgcgggg
aaaatgctctgcagcaagatcctggagaagacggccaaccctcagtggaaccagagcatc
acggtgcctgccatgtttccctccatgtgtgagaaaatgaggattcgtgtcatagactgg
gaccgccttacgcacaacgacattgtggccaccacctacctgagtatgtcgaaaatctct
gcctctggaggagaaatagaagaggagtctgcaggtgtggtcacgcctcctccagccaca
gacctggatgaccatctgggcttcctccccaccttcgggccctgctatgtcaacctctac
ggcagccccagggagttcactggcttcccggacccctatgcagagctcaacacgggcaag
ggggaaggtgtggcctaccgaggccggcttctgctctccctggagaccaagctggtggag
cacagcgaacagaaggtggaagatctccctgccgatgacatccttcgggtggagaaatac
ctccggaggcgcaaatactcgctctttgccaccttctactcggccaccatgctgcaggac
gttgacgacgcagtccagtttgaggtcagcatcgggaactacgggaacaagttcgacacg
acctgcctgccactggcctccaccacccagtacagccgggcggtctttgatggatgccac
tactactacttaccctggggcaacgtgaagcccgtggtggtgctgtcatcctactgggag
gacgtcagccacagagtcgaggcccagaaccagctgctttggatcgctgaccagctggaa
gccggcctggagcaggtccacttggccctgaaggctcagcactccgccgaggacgtggac
tccctggtggctcagctgacggatgagctcatcgcaggctgcagccaacccctgggtaat
gttcaagagacgccctccgccacccacctggaccactacctgtaccgcctgcgcacccgt
cacctgagccagatcactgaggcggcccaggccctgaagctcggccacagtgaactcccc
accgccctggagcaggccgaggactggctcctgcgtctccgtgccctggcagatgagccc
cagaacagcctgcctgacatcgtcatctggatgctgcagggtgacaagcgggtggcatac
cagcgggtgcccacccacgaggtcctcttctcccgacggggcaccagctactgtggcaag
aattgtggaaagctgcagacgatgtttctgaaatatccaatggagggggtgcccggagcc
cggatgccagttcagattcgggtcaggctctggttcgggctctctgtggatgaaaaggag
ttcaaccagtttgctgagggcaagctctccgtctttgctgaaacctatgagaaccagacc
aagctggctctggtcggcaactggggcacaacgggcctcacctaccccaaattttctgac
gtcacgggcaagatcaagctaccgaaggagagcttccgcccctcagctggctgggcctgg
gctggagactggttcgtgtgtccagagaagaccctgcttcacgacaccgacgcgggccac
ctgagcttcgtggaggaagtgtttgagaaccagacccggctccccggaggccagtggatc
tacatgagcgacaactacacggacgtgaatggggagaaggtgcttcccaaggatgacatc
gagtgcccgctgggctggaagtgggaagatgaagagtggtccacggacctcaatcgggcc
gttgacgaacaaggctgggagtacagcatcaccatccccccggaccggaagccgaggcac
tgggtccctgctgagaagatgtactacacacaccgtcggcggcgctgggtccgcctgcgc
aggagggacctcagccagatggaggcgctgaagaggcacaggcagacagaggcggagggt
gagggctgggagtacgcctcgctctttggctggaagttccgcctggagtaccgcaagaca
gatgcctttcgccgccgccgctggcgccgccgcatggagccactggagaagacggggcct
gcagctgtgtttgccctcgagggggccctgggcggcgtggtggacgacaggagtgaagat
tccaagtctgtctccaccttgagctttggcgtgaacagacccacgatttcctgcatcttt
gactacgggaaccgctaccatctgcgctgctacctgtaccaggcccgggatctgcctgcg
atggacaaggactccttttctgatccctatgcgatagtctccttcatgcaccagagccag
aagacggtggtggtgaagaacaccctgaaccccacctgggaccagacactcatcttctac
gagattgagatcttcggtgagctggccagcatcgccgagcagccggccagcattgtggtg
gagctgtatgaccacgacacctatggtgcagatgagtttatgggacgctgcatctgtcag
ccgagtctggaacggatgccccggctggcctggttcccgctgaccaggggcaaccagccg
gcgggtgagctgctggcctcttttgagctcatccagagagagaagccggccatccaccat
atccctggttttgaggtgcaggatacatcagggatcctggaagagctgtgtgcacccgcc
gtcttcctccagggcctcctgcaaacgtcggaggacacggacctaccctatccgccaccc
cagagggaggccaacatctacatggtcccccagaacatcaagcctgttctccagcgaacc
gccatcgagatcctggcgtggggccttcggaacatgaagagctaccagctggccagcgtg
tcctccccgagcctggtggtggagtgcgggggccagaccgtgcagtcctgtgtcatcaag
aacctccggaagaaccccaactttgacatctgcaccctcttcatggaagtgatgctgccc
agggaggagctctactgtccccccgtcgtgatcaaggtaattgataatcgccagtttggc
cgccggcctgtggtgggccagtgtaccatccgctccctggagagcttcctgtgcgaccct
tactcagaggagagtccatccccacagggcggcccagatgacgtgagcttactcagtcct
ggggaagatgtgctgattgacatcgacgacaaggagcccctcatccccatccagcttgca
gatggtctgtcgggcttcgcccccactaacatggcgtcttctccatccagtcgtcatgag
gaggagttcattgattggtggagcaaattctttgcctcgataggggagagggaaaagtgc
gggtcctacctggagaaggacttcgacactctaaaggtctatgacacaccactggagaat
gtgaaggactttgagggcctgtctgacttttgtaacaccttcaagctctaccggggcaag
actcaggaggagatggaagacccgtctgtcattggggagtttaagggcctcttcaaaatt
tatcccctcccagaagacccggccatccccattcccccaagacagttccaccagctggct
tcccaggggccccaggaatgcctggtccgcatctacattatccgagcgtttggcctgcag
cccaaggaccccaatgggaagtgtgatccttacatcaggatctccatagggaagaagtcg
gtgagtgaccaggacagctacatcccctgtactctggagcctgtgtttggaaagatgttc
gagctgacctgcactctgcctctggagaaggacctgaaggttaccctctatgactacgac
ctcctctccaaggacgaaaagatcggggagacggttatcgacctggagaacaggctgctg
tccaagtttggggctcgctgcggactcccccagacctactgcatctctggacccaaccag
tggcgggatcagctccatccctctcagctcctccacctgttctgccagcagcgcagagtc
aaggcccccgtgtaccggacagaccgtgtagtgtttcaggatacagaatacaccatcgaa
gaaatagaggctggcagggttccgaacccacacctgggcccagtggaggagcgtctggcc
ttgcatgtcctccggcagcagggcctggtccctgagcacgtggagtcccggcccctctat
agtcccctgcagccggacatcgagcaggggaagctgcagatgtggatcgacctgtttcca
aaggccctggggcggccgggacctcctttcaacatcaccccacggagagccagaaggttt
ttcctgcgttgtattatttggaacaccaaggatgtgatcctggacgacctcagcatcacc
ggggagaagatgagcgacatttacgtgaaaggttggatggttggctttgaagagcacaag
cagaagacagatgtgcattaccggtccctgggaggtgaaggcaactttaactggaggttc
attttcccttttgactacctgccagctgagcaagtctgcactgtctccaagaaggatgct
ttctggaggctggacaagacagagagcaagatccccgcccgagcggtattccagatctgg
gacaacgacaagttctcctttgatgactttctgggctctctgcagctggacctcaaccgc
atgcctaagcctgccaagacagctgagaagtgttccctggaccagctggatgacactttc
cacccggagtggtttgtgtccctttttgaacagaaaacagtgaagggctggtggccctgt
gtggcggaccagggtgagaagaagatactggcgggcaagttggagatgactttggagatt
gtggccgagagcgaacatgaggagcggccggccggccagggccgagatgagcccaacatg
aaccccaagctcgaggacccaaggcgccctgacacctccttcctctggttcacctccccg
tacaagactatgaagttcatcctctggcgacggttccggtgcgccatcatcctcttcgtc
cttctcttcattctcctgctgttcttgggcatcttcgtctactccttcccgaactatact
gccatgaagctggtgaagccattcagctga
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