Phocoena sinus (vaquita): 116764423
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Entry
116764423 CDS
T07759
Symbol
SMYD1
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1 isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00310
Lysine degradation
psiu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116764423 (SMYD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116764423 (SMYD1)
Enzymes [BR:
psiu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
116764423 (SMYD1)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
116764423 (SMYD1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
116764423 (SMYD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
Motif
Other DBs
NCBI-GeneID:
116764423
NCBI-ProteinID:
XP_032508928
Ensembl:
ENSPSNG00000010676
UniProt:
A0A8C9BSU3
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Position
13:77445145..77482877
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AA seq
490 aa
AA seq
DB search
MTIGGMENVEVFTSEGKGRGLKATKEFWAADVIFAERAYSAVVFDSLVNVVCHTCFKRQE
KLHRCGQCKFAHYCDRTCQKDAWLNHKNECSAIKRHGKVPNENIRLAARVMWRVEREGGG
LTEGCLVPVDDLQSHVEHFGEEALKELRGDVDTFLQYWPPQSQQFSMQYISRIFGVINCN
GFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALG
KISEGEELTVSYIDFLNVSEERKKQLKKQYYFDCTCEHCQKGLKDDLFLGVKDDPKPSQE
VVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLQKQEPVLADTNIYTLRMLSTVSEV
LSYLQAFEEASHYARRMVDGYMKLYHPNNAQLGMAIMRAGLTNWHAGNIEVGHSMICKAY
AILLVTHGPSHPITKDLEAMRVQTEMELRMFRQNEFMYHKMREAALNNQPMQVMAEPSNE
PAPALFHKKQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacaatagggggaatggagaacgtggaggtcttcacttctgagggcaaaggcagaggt
ctgaaggccactaaggagttctgggctgctgacgtcatctttgccgagcgggcttattcc
gcagtggtctttgacagccttgtgaatgttgtgtgccacacttgcttcaagaggcaggag
aagctccaccgctgcgggcagtgcaagtttgcccattactgtgaccgcacctgccagaag
gatgcttggctgaaccacaagaacgagtgttcggccatcaagagacatgggaaggtgccc
aatgagaacatcaggctggcggcgcgcgtcatgtggcgggtggagagagagggcggcggg
ctcacggagggctgcctggtccccgtggacgacctgcagagccacgtggaacacttcggg
gaggaggcgctgaaagagctgcggggggacgtggacactttcctgcagtactggccgccc
cagagccagcagttcagcatgcagtacatctcgcggatcttcggcgtgattaactgcaat
ggtttcacgctcagtgaccagagaggcctgcaggcagtgggtgtgggcatcttccccaac
ctgggcctggtgaaccatgactgttggcccaactgcacggtcatatttaacaacggcaat
catgaggcagtgaaatccatgtttcacacccagatgagaattgaactccgggccctgggc
aagatctcagaaggagaggagctgaccgtgtcctatatcgacttccttaacgtcagcgaa
gaacgcaagaagcagctgaagaagcagtactactttgactgcacgtgtgagcactgccag
aaagggctgaaggacgacctcttcctgggtgtgaaagacgacccgaagccctctcaggag
gtggtgaaggagatgatacagttctccaaggatacgctggaaaaaattgacaaggctcgc
tctgagggtttgtaccacgaggttgtgaaattatgccgggagtgcctacagaagcaggag
ccagtgttggccgacaccaacatctacacactgcggatgctgagcaccgtttccgaggtc
ctctcctacctgcaggcctttgaggaggcctcacactacgccaggaggatggtggatggc
tatatgaagctgtatcaccccaacaatgcccagctgggcatggccatcatgcgggcaggg
ctgaccaactggcatgctggcaacattgaggtggggcacagcatgatctgcaaagcctac
gccattctcctggtgacacacggaccctcccaccccatcaccaaggacttagaggccatg
cgggtgcagacggagatggagctgcgcatgttccgacagaacgagttcatgtaccacaag
atgcgcgaggccgccctgaacaaccagcccatgcaggtcatggctgaacccagcaatgag
ccggcgccggctttgttccacaagaaacaatga
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