Phocoena sinus (vaquita): 116764427
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Entry
116764427 CDS
T07759
Symbol
STAMBP
Name
(RefSeq) STAM-binding protein isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116764427 (STAMBP)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116764427 (STAMBP)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116764427 (STAMBP)
04121 Ubiquitin system [BR:
psiu04121
]
116764427 (STAMBP)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116764427 (STAMBP)
Peptidases and inhibitors [BR:
psiu01002
]
Metallo peptidases
Family M67
116764427 (STAMBP)
Membrane trafficking [BR:
psiu04131
]
Endosome - Lysosome transport
Others
Others
116764427 (STAMBP)
Ubiquitin system [BR:
psiu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
116764427 (STAMBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP8_dimer
JAB
Prok-JAB
DUF5876
FAM176
Motif
Other DBs
NCBI-GeneID:
116764427
NCBI-ProteinID:
XP_032508931
Ensembl:
ENSPSNG00000011437
LinkDB
All DBs
Position
13:64015313..64049625
Genome browser
AA seq
423 aa
AA seq
DB search
MSDRGDVSLPPEDRVRALSQMGSAVEINEDIPPRRYFRSGMEIIRMASIYSEEGNIEHAF
ILYNKYITLFIEKLPKHRDYKSAVIPEKKDTVKKLKEIAFPKAEELKAELLKRYTKEYID
YNEEKKKEEEELAQNVAIQQELEKERQRVAQQKQQQLEQEQFHAFEEMIRNQELEKERLK
IVQEFGKVDPGLDGPLVPDLEKPSLDVFPTAPVIYTQPSDCNTTVRPAKPPVVDRSLKPG
ALSNSEAPTIDGLRHVVVPGKLCPRFLQLASANTARGVETCGILCGKLMRNEFTITHVLI
PKQSAGSDYCNTENEEELFLIQDQQGLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPE
SIAIVCSPKFQETGFFRLTDHGLEEISSCRQKGFHPHSKDPPLFCSCSHVTVVDRAVTIT
DLR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccgtggagatgtgagcctcccacccgaagaccgggtgagggctctctcgcag
atgggtagcgcagtggagataaacgaagacattccaccccgtcggtacttccgctctgga
atggagattatccgaatggcatctatttactctgaggaaggcaacattgaacatgcattc
atcctctataacaagtatatcacgctctttattgagaaactaccaaagcatcgagattac
aaatcggctgtcattcctgaaaagaaagacacagtaaagaaattaaaggagattgcattt
cccaaagcagaagagctgaaagcagaactgttaaaacgatataccaaagaatatatagac
tataatgaagaaaaaaagaaggaagaggaagaattggcccaaaatgtagccatccagcaa
gagctggaaaaggaaagacagagggtggcacaacagaagcagcaacagttggagcaggaa
cagttccatgcctttgaggagatgatccggaaccaggaactagaaaaagaacgactgaaa
attgtacaggagtttgggaaggtggaccctggcctggacggcccactggtacctgactta
gagaagccctccctagatgtgttccccacggcacctgttatatacacacagccttcggac
tgtaatacaactgtaaggcctgccaagccacctgtagtggatagatccttgaaacctgga
gcattgagcaactcagaagctcctacaatcgatggactgcgccacgtggtggtgcctggg
aagctctgcccacggtttctccagttggccagtgccaacactgcccggggagtagagaca
tgtggaattctctgtggaaaactgatgaggaatgaatttaccattacccatgtcctcatc
cccaagcaaagtgctgggtctgattattgcaacaccgagaacgaagaagagcttttcctc
atacaggatcagcagggtctcatcaccctgggctggattcacactcatcccacgcagacc
gccttcctctccagtgtagacctacacactcactgctcctaccagatgatgttgccagag
tcgatagccattgtttgttcccccaagttccaggaaactggattctttagactaactgac
cacggactagaggagatttcttcctgtcgccagaaaggatttcatccacacagcaaggat
ccgcctctcttctgtagctgcagccacgtgactgttgtggacagagcagtgaccatcaca
gaccttcgatga
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