Phocoena sinus (vaquita): 116764490
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Entry
116764490 CDS
T07759
Symbol
OTX1
Name
(RefSeq) homeobox protein OTX1 isoform X1
KO
K09326
homeobox protein OTX1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
116764490 (OTX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116764490 (OTX1)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
116764490 (OTX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
116764490
NCBI-ProteinID:
XP_032509041
Ensembl:
ENSPSNG00000014688
UniProt:
A0A8C9CCR8
LinkDB
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Position
13:53483535..53490512
Genome browser
AA seq
355 aa
AA seq
DB search
MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGSGTKSRPAKKKSSPVRESSG
SESSGQFTPPAVSSSASSSSSASSASANPAAAAAAGLGGNPAVAVPSSLSTPAASSIWSP
ASISPGSAPASVSVPEPLAAPSNASCMQRSVAAGAASAAASYPMSYGQGGSYGQGYPAPS
SSYFGGVDCSSYLAPMHSHHHPHQLSPMAPSSMASHHHHHPHAHHPLSQSSGHHHHHHHH
HHQGYGGSGLAFNSADCLDYKEPGAAAASSAWKLNFNSPDCLDYKDQASWRFQVL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttacctcaaacaacccccatacggcatgaacgggctgggcctagccgggccg
gctatggacctcctacacccctccgtgggctatccggccaccccgcggaagcagcgacgg
gagcgcaccacctttacgcgctctcagctggacgtgctcgaggcactcttcgccaagact
cgctaccctgacatcttcatgcgcgaggaggtggcgctcaagatcaacctgccagagtcc
agagtccaggtctggttcaagaatcgccgcgccaaatgccgccagcagcagcagagcggg
agcgggaccaagagccgcccagccaagaagaagtcctccccggtgcgagagagctcgggc
tccgaaagcagcggccagttcacgccgcccgctgtgtccagttccgcctcgtcctccagc
tccgcatcgagcgcttcggccaacccggcggctgcagcggctgcaggcctgggcgggaac
ccggcggtggcagtcccgtcgtcgttgagtacgccggctgcctcgtccatctggagtccg
gcttccatctcgcccggctcagcgcccgcttccgtgtcggtgcccgagcctttggccgcg
cctagcaacgcatcgtgtatgcagcgctcggtagccgcaggcgccgcctctgccgcagcc
tcctatcccatgtcctacggccagggcggcagctatggccagggctaccccgcgccctcc
tcttcctactttggcggcgtggactgcagctcatatctagcgcccatgcactcgcaccac
cacccgcaccagctcagccctatggcaccctcctccatggctagccaccatcaccaccat
ccccacgcgcaccacccgttgagccagtcctcaggccaccaccaccaccatcaccaccac
catcaccagggctacggcggctcggggctcgccttcaactctgccgactgcttggattac
aaggagcctggcgccgccgccgcttcctccgcttggaaactcaacttcaactcgcctgac
tgtctggactataaggaccaagcctcatggaggtttcaggtcttgtga
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