Phocoena sinus (vaquita): 116764638
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Entry
116764638 CDS
T07759
Name
(RefSeq) guanylate-binding protein 1-like isoform X1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116764638
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
PhiKZ_gp86
Rib_mS39_PPR
Motif
Other DBs
NCBI-GeneID:
116764638
NCBI-ProteinID:
XP_032509300
Ensembl:
ENSPSNG00000013042
LinkDB
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Position
1:complement(79429778..79440902)
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AA seq
643 aa
AA seq
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MASETHMSGPECLIENTNGRLLVNPKALKILSAIQQPVVVVAIVGLYRTGKSYLMNKLAG
ENKGFSLGSTVQSHTKGIWMWCVPHPKKPERTLVLLDTEGLGDVEKGDNQNDSWIFALAI
LLSSTFVYNSMGTINQQAMDQLHYVTELTDRIRAKASPDVDGVEDSADFVSFFPDFVWTL
RDFSLDLEADGQSITADEYLENSLKLKKGTSQKDKNFNLPRLCIRKFFPKKKCFIFDRPT
DRKKLGQLEELCDDKLDPEFVQQAAVFCSYIFRNSKTKTLSGGIKVNGPRLETLVQTYVS
AINSGDLPCMENAVLALSEIENTAAVKKAIAHYDQQMDQKLQLPTETLQELLDLHRTIEK
EAIEVFMRMSWKDIDHLFQKELAPPPLWSSGFGRAGSAAMAHGPSCSVECGIFPHWGTNP
CPLHRQADSQPLCHQAQLDEKRDDFCKKNRKASSDRCSALLKDIFSPLEEGVKEGIYSKP
GGYRLFIEKIQELKKKYLQEPRKGIQAEEILQEYLKSKESVTAAILQTDQTLSEKDRLIE
VERVKAESAQAAAKMLEEMQIKNQQMMEQKEKSYQEHVKQLTEKMERDRAQLLEEQERTL
SLKLQEQRRLLQEGFQEENRRLHEEIQNLQKKMKKPRKQCCLS
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagagacccacatgtcaggcccagagtgcctcatcgagaacactaatgggcga
ctgttggttaatccgaaagctctgaagatcctgtctgccattcagcagcccgttgtggtg
gtggctatcgtgggcctctaccgcaccggtaaatcctacctgatgaacaagctggctggg
gagaacaagggtttttctctgggctccacggtgcagtctcacacgaagggcatctggatg
tggtgtgtgcctcatcccaagaagccagaacgtactctagttctgcttgatactgagggc
ctgggggatgtggagaagggtgacaaccagaatgactcctggatatttgccctagcaata
ctcctgagcagcacttttgtgtacaatagtatgggaaccatcaaccagcaggccatggac
caacttcactatgtgacggagctcacagatagaatcagggcaaaagcttcacctgatgtg
gatggggttgaggattcagctgactttgtgagcttctttccagactttgtatggacactg
agggatttctccctagacttggaggcagatggacaatccatcacagcagacgagtacctg
gagaattcactcaagcttaagaaaggtaccagtcaaaaagataaaaattttaatctgcct
cgactctgtatccggaagttcttcccaaagaagaaatgctttatcttcgatcggcccact
gataggaagaaactgggccagcttgaggaactgtgtgatgataagctggaccccgaattt
gtgcaacaagctgcagtcttctgttcctacatctttagaaattccaaaactaaaaccctt
tcaggaggcatcaaggtcaatggacctcgtctagaaaccctggtgcagacctatgtcagt
gccatcaatagtggggatctgccctgcatggagaatgcagtcctggccttgtctgagatc
gagaacacagctgcagtgaaaaaggccattgcccactatgaccagcagatggatcagaag
ctgcagctgcccacggaaaccctccaggagctgctggacctgcacaggactattgagaag
gaggccattgaagtcttcatgaggatgtcctggaaagatatagaccatttatttcaaaag
gaattagcgcctcccccattgtggagctcaggcttcggacgcgcaggctcagcagccatg
gctcacgggcccagctgctccgtggaatgtgggatcttcccgcactggggcacgaacccg
tgtcccctgcatcggcaggcggactctcaaccactgtgccaccaggcccagctagacgaa
aagcgagatgacttttgtaaaaagaatcgtaaagcatcatcagatcgttgctcagcttta
cttaaggatattttcagtcctctagaagaaggtgtgaaagaggggatttattctaaacca
ggaggctatcgcctcttcattgaaaagatacaagagctgaagaaaaagtatcttcaggag
cccaggaagggaatacaggctgaagaaattcttcaggaatacttgaagtccaaggagtct
gtgactgctgcaattctacagacagaccagactctctcagagaaggacaggttgattgaa
gtggaacgtgtgaaagctgaatctgcacaagctgcagcaaaaatgctggaggaaatgcaa
ataaagaatcagcagatgatggaacagaaagaaaagagttatcaggaacatgtgaaacaa
ctgactgagaagatggagagggatagggcccagttgctggaagagcaagagagaactctc
tctctcaaacttcaggaacagcgccgactactacaggaaggattccaagaagagaacaga
cgacttcatgaagaaatacagaatctccagaagaagatgaaaaaaccaaggaagcaatgt
tgcctaagctaa
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