Phocoena sinus (vaquita): 116764696
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Entry
116764696 CDS
T07759
Symbol
LRRTM1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
116764696 (LRRTM1)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_EndoS
LRR_NXF1-5
HemY_N
UL97
LRR_12
Motif
Other DBs
NCBI-GeneID:
116764696
NCBI-ProteinID:
XP_032509406
Ensembl:
ENSPSNG00000018662
UniProt:
A0A8C9CIP8
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Position
13:complement(71005485..71008357)
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AA seq
522 aa
AA seq
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MDFLLLGLCLYWLLRRPSGVVLCLLGACFQMLPAAPSGCPQLCRCEGRLLYCEALNLTEA
PHNLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTL
SSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRI
FQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCL
RRNKVAIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPRIL
NSWKSLTSVTLAGNLWDCGRNVCALASWLSNFQGRYDGNLQCASPEYAQGEDVLDAVYAF
HLCEEGAEPTSGHLLSAVTNRSDLGSPAGPATTLADGREGQPDSTPELATVALPGGEHAE
NAVQIHKVVTGTMALIFSFLIVVLVLYVSWKCFPASLRQLRQCFVTQRRKQKQKQTMHQM
AAMSAQEYYVDYKPNHIEGALVIINEYGSCTCHQQPARECEV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctgctgctcggtctctgtctatactggctgctgaggaggccctcgggggtg
gtcttgtgtttgctgggggcctgctttcagatgctgcccgccgcccccagcgggtgcccg
cagctgtgccggtgcgaggggcggctgctgtactgcgaggcgctcaacctcaccgaggcg
ccccacaacctgtccggcctgctgggcttgtccctgcgctacaacagcctctcggagctg
cgcgccggccagttcacggggttaatgcagctcacgtggctctatctggatcacaatcac
atctgctcggtgcagggggacgcctttcagaaactgcgccgagttaaggaactcacactg
agttccaaccagatcacccaactggccaacaccaccttccggcccatgcccaacctgcgc
agcgtggacctctcgtacaacaagctgcaggcgctcgcgcccgatctcttccacgggctg
cggaagctcaccacgctgcacatgcgggccaacgccatccagttcgtgcccgtgcgcatc
ttccaggactgccgcagcctcaagtttctcgacatcggatacaatcagctcaagagtctg
gcgcgcaactctttcgccggcttgttcaagctcaccgagctgcacctggagcacaacgac
ttggtcaaggtgaactttgcccacttcccccgcctcatctccctgcactcgctctgcctg
aggaggaacaaggtggccattgtggtcagctcgctggactgggtatggaacctggagaaa
atggacctgtcgggcaacgagatcgagtacatggagccccatgtgttcgagaccgtgcca
cacctccagtccctgcagctggactccaaccgtctcacctacatcgagccccgtatcctc
aactcctggaagtcgctgacgagcgtcaccctggccgggaacctctgggactgtgggcgc
aacgtgtgcgccctggcctcatggctcagcaacttccaggggcgctacgatggcaacttg
cagtgcgccagccccgagtacgcacagggcgaggacgtcctggacgcagtgtacgctttc
cacctgtgcgaggagggggccgagcccaccagcggccacctgctctccgccgtcaccaac
cgcagcgacctgggatcccccgccggcccggccaccactctcgctgacggcagggagggg
cagcccgacagcacgcctgagctggctaccgtggccctcccaggcggcgaacacgccgag
aacgctgtgcagattcacaaggtggtcaccggcaccatggccctcattttctccttcctc
atcgtggtcctggtgctctatgtctcttggaagtgcttcccagccagtctcaggcagctc
agacagtgctttgtgacgcagcgcaggaagcaaaagcagaaacagaccatgcatcagatg
gctgccatgtctgcccaggaatactacgttgattacaaaccgaaccacattgagggagcc
ctggtcatcatcaacgagtatggctcttgtacctgccaccagcagcccgccagggaatgc
gaggtgtga
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