Phocoena sinus (vaquita): 116764793
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Entry
116764793 CDS
T07759
Symbol
EDAR
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04060
Cytokine-cytokine receptor interaction
psiu04064
NF-kappa B signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
116764793 (EDAR)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116764793 (EDAR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
psiu04050
]
116764793 (EDAR)
Cytokine receptors [BR:
psiu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
116764793 (EDAR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
Motif
Other DBs
NCBI-GeneID:
116764793
NCBI-ProteinID:
XP_032509684
Ensembl:
ENSPSNG00000011548
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All DBs
Position
13:complement(89972977..89989142)
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AA seq
449 aa
AA seq
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MAHRRGSTRMAWLPILVASLACWAGAEDATCGENEFYNQTAGLCHECPPCGPGEEPYLSC
GYGTRDEDYGCVPCPAEKFSKGGYQICRRHKDCEGFFRATVLTPGDTEHDAECGPCLPGY
YMLENRPRNIYGMVCYSCLLAPPNTKECVGAVSGVPASFPRTPGSSTLSPSQLVHKAELS
GQGHLATALVIAMSTIFTMAVALVLIIMFYILKARPPAPACCPSAPVKSPEAPVSQEEEK
KAAPDSVVMFSEQDEFEKLTAAPAKSAKSENDASSEEEQLLNRSLDSDEELAPDGQGPSE
LCLLSLVHLAREKPSTATKAAGIQSRRKKILDVYANVCGVVEGLSPTELPFDCLEKTSRM
LSATYNSEKAVVKTWRHLAESFGLKRDEIGGMTDGLQLFDRISTAGYSIPELLTKLVQIE
RLDAVESLCADILEWAGIPPPAAPPPPAS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcccacaggagaggcagcacacggatggcctggctgcccatcctggtggcgtccctg
gcatgctgggctggagcggaggacgccacctgcggcgagaacgagttctacaaccagacc
gcgggtctgtgccacgagtgtcccccgtgcgggccgggggaggagccctacctgtcctgc
ggctacggcaccagagacgaggactacggctgcgtgccctgccccgcggagaagttctcc
aagggcggctaccagatctgccggcgccacaaggactgcgagggctttttccgggccacg
gtgctgacgccgggggacacggagcacgacgccgagtgtgggccctgcctccccggctac
tacatgttggagaacaggcctcggaacatctacggcatggtctgctactcctgcctgctg
gcgccccccaacaccaaggaatgtgtgggagccgtctccggagtccctgccagcttcccg
cgcacgcccggcagtagcaccctgtccccgtcccagctcgtccacaaagcagagctctcg
ggccaaggacacctggccacggccctggtcatcgccatgtccaccatcttcaccatggcc
gtcgccctcgtcctcatcatcatgttctacatcctgaaggccaggcctcccgccccagcc
tgctgccccagcgcccccgtgaagagcccggaagctcccgtgagccaggaggaggagaag
aaagcggccccagacagcgtggtgatgttctccgagcaggacgaattcgagaagctgacg
gcagctccggcgaagtcggccaagagtgaaaacgacgcctcatcggaggaggagcagctg
ctgaaccggagcctggacagcgacgaggagctggcccccgacgggcagggcccctcagag
ctgtgcctgctgtcgctggtccacctggccagggagaagccgtccaccgccaccaaggcg
gccgggattcagagtcgaaggaagaaaatactggacgtgtatgccaacgtgtgtggcgtt
gtggaaggcctcagccccacggagctgccgttcgactgcctggagaagaccagccggatg
ctcagcgccacgtacaactcggagaaggccgtggtgaagacgtggcgccacctggccgag
agcttcgggctcaagcgggacgagatcgggggcatgacggacggcctgcagctctttgac
cgcatcagcacggccggctatagcatcccggagctgctcaccaagctggtgcagatcgag
cggctggacgccgtggagtccctgtgcgcagacatcctggagtgggcggggatcccgccg
cccgccgccccgccgccccccgcgtcctga
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