Phocoena sinus (vaquita): 116764891
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Entry
116764891 CDS
T07759
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116764891 (TFIP11)
Spliceosome [BR:
psiu03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
116764891 (TFIP11)
Other components
Complex C specific factors
116764891 (TFIP11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
116764891
NCBI-ProteinID:
XP_032509703
Ensembl:
ENSPSNG00000011834
UniProt:
A0A8C9C2S5
LinkDB
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Position
14:69646572..69673340
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AA seq
838 aa
AA seq
DB search
MSLSHLYRDGEGQGLMDDEDERENFEITDWDLQNEFNPNRQRHWQTKEEATYGVWAERDS
DEERPSFGGKRARDYSAPVNFISAGLKKGAAEEPELDGSDDEEKPVKQDEFPKDFGPKKL
KTGGNFKPSQKGFAGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPI
EAKQRKGKGAVGAYGSERTTQPLQDFPTADSEEEAEEEFQKELSQWRKDPSGGKKKPRYS
YKTVEELKAKGRISKKLAAPQKELSQVKVIDMTGREQKVYYSYSQISHKHSVPDDGLPLQ
SQQPPQPGKEAKAPGFALPELEHNLQLLIDLTEQEIIQNDRQLQYERDMVVNLSHELEKV
SEVLEHEERAISNLSKVLGLVEECERRLQPGCGDPLTLDECARIFETLQDKYYEEYRMSD
RVDLAVAIVYPLMKDYFKEWDPLKDCTYGTEIISKWKSLLENDQLLSHGGQDLSADAFHR
LIWEVWMPFVRNIVTHWQPRNCDPMVDFLDSWVHIIPVWILDNILDQLVFPKLQKEVENW
NPLTDTVPIHSWIHPWLPLMQARLEPLYSPIRSKLASALQKWHPSDSSAKLILQPWKDVF
TPGSWEAFMVKNIVPKLGMCLGELVINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFF
PKWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNV
GAYMQPGARENIAYLTHTERRKDFQYEAMQERREAENMAQRGIGVAASSVPMNFKDLIET
KAEEHNIVFMPVIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgtcccacttgtaccgggacggggaaggccaaggcctcatggatgacgaggat
gagcgggagaactttgagatcaccgactgggatctccagaatgaattcaaccccaaccgg
cagcgccactggcagaccaaggaagaggccacctacggagtgtgggcagagcgagactcg
gatgaagagaggcccagctttggaggcaaacgggcccgcgactactcggcaccagtcaac
ttcatcagcgcggggctcaagaaaggggcggcagaagagccagagctggacggctccgac
gatgaggagaaacctgttaagcaggatgaatttcctaaggatttcggaccaaagaagtta
aaaacgggtggcaattttaaacccagccagaaaggttttgcaggaggaaccaagtctttc
atggattttggcagctgggaaagacacacaaaaggaattggacagaagcttcttcagaag
atgggctatgtccctggaagaggcctcgggaagaacgcacaaggcatcatcaacccaatc
gaagccaagcagagaaaggggaagggcgccgtgggggcttacggctcggagcgcaccact
cagcccctgcaagacttccccacggctgactccgaagaagaagccgaggaggaatttcag
aaggagctgagccagtggaggaaagaccccagtggaggcaagaagaagcccagatactct
tacaagacagtggaagagttgaaagccaagggcaggattagcaagaagctcgctgctccc
cagaaggagctttctcaggtcaaggtcatagacatgacgggccgggagcagaaggtctac
tacagctacagccagatcagccacaagcacagcgtccccgacgacgggctcccgctgcag
tcacagcagccgccccagcccggcaaggaggccaaggcccccggcttcgcactgccagag
ctggagcacaacctgcagctgctcatcgacctcacagagcaggagatcatccagaacgac
cggcagctgcagtatgagcgagacatggtggtcaacctgtcccacgagctggaaaaggtg
tcggaggtcctggagcacgaggaacgggccatctccaacctgagcaaggtcctggggctc
gtggaggagtgcgagcggcgcctgcagcccggctgcggtgaccccctcaccctggacgag
tgcgcccgcatcttcgagaccctgcaggacaagtactatgaggagtacaggatgtccgac
cgcgtggacctggccgtggccatcgtctacccgctcatgaaggactacttcaaggagtgg
gaccccctcaaggactgtacgtatggcaccgagatcatctccaagtggaaaagcctcctg
gagaacgaccagctgttgtcccacggcgggcaggacctctctgcagatgccttccacagg
ctgatatgggaagtctggatgccgtttgttcgaaatatcgtcactcactggcaaccgagg
aactgtgacccgatggtggactttctggatagctgggtgcacatcattcccgtgtggatc
ctggataacatcctggaccagctcgtcttccccaagctgcagaaggaggtggaaaactgg
aacccgctcacagacaccgtccccatccactcgtggatccacccgtggctgcctctcatg
caggcgcgcctggagccgctctactcccccatccgcagcaagctggccagcgccctgcag
aagtggcaccccagcgactcctcggccaagctcatcctccagccctggaaagatgtcttc
acccccggctcctgggaagcattcatggtcaagaacatagtgcccaaactggggatgtgc
ctcggggagttggtcatcaacccccaccagcagcacatggatgctttttattgggtcatc
gactgggaagggatgatctctgtctccagcctggtggggcttcttgaaaagcacttcttc
cccaagtggcttcaggtgctgtgctcctggctcagtaacagcccaaattacgaggagatc
accaagtggtacctgggttggaagtccatgttctcagaccaagtgctggcgcacccatcc
gtcaaggacaaatttaacgaggcgcttgatatcatgaacagggcggtgtcctccaatgtc
ggtgcctacatgcagcccggagcacgggagaacatcgcctacctcacccacacggagcgg
aggaaggatttccagtacgaggccatgcaggaacgacgagaggctgagaacatggcccag
agaggcatcggcgtggctgccagctccgtgcccatgaactttaaagacctcattgagacc
aaggccgaggagcacaacatcgtcttcatgcccgtcatcgggaagcgacacgaagggaag
cagctgtacaccttcggccgcatcgtcatctacatcgataggggcgtggtgttcgtgcag
ggggagaagacctgggtgcccacctccctgcagagcctgattgacatggccaagtag
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