Phocoena sinus (vaquita): 116765128
Help
Entry
116765128 CDS
T07759
Symbol
MTCL1
Name
(RefSeq) microtubule cross-linking factor 1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116765128 (MTCL1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
116765128 (MTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TSC22
Motif
Other DBs
NCBI-GeneID:
116765128
NCBI-ProteinID:
XP_032510266
Ensembl:
ENSPSNG00000016975
LinkDB
All DBs
Position
14:59131054..59255048
Genome browser
AA seq
1954 aa
AA seq
DB search
METLNGPAAGGAPDAKPQPPGQHHRHHYLHPLAERRRLHRAPSPARPFLKDLHGRPAAPG
PAAPSSGRAPAPAAPRSPSLAGKAPPSLGPPAAPGRVSRRSGGAPGAKDKPPPGAGARAA
GGAKAAPGPRKAARAAPAEPLPRVGKPPPGAEPLPAAAKGRKAKRGSGVVPARASDPRVP
IVPVPAVILAVTPAAGSPAPGSRISHTDSSSDLSDCPSDPLSDEQRLIPAASSDAESGTG
SSDREPQRGAPTTSPAARGAPTGSPEPLPLLVAPPAACLGGRSSPSGVPAGSPGPGVAED
AGGCAPPERTVPGNPKEHCPGEQPRLVPAAAAAEELLREMEELRSENDYLKDELDELRAE
MEEMRDSYLEEDVYQLQELRRELDRANKNCRILQYRLRKAEQKSLRWQRTGQVDGELIRS
LEQDLKVAKDVSVRLHHELETVEEKRAKAEGENETLRQQMIEVEISKQALQNELERLKES
SLKRRGSREMYKEKKAFAQSGGTERLGNCRSAARTQRKLAPRRKDDSADLRCQLQFAKEE
GSLMLRKMAKLGREKDGLEQELQRYKALYGDVDSPLPTGEAGGPPSTREAELKLRLKLVE
EEASILGRKIVELEVENRGLKAEMEDLRGQHERDAAGREPLPGVPTSPFGDSLESSAELR
RHLQFVEEEAELLRRSISEIEDHNRQLTHELSKFKFEPRPEPAWPVGGASGGAPLQEELQ
AARLQIRELSGKVLTLQHENQVLLLGAPRCDPAAPPGPRAPSSRDSDADSDAGKKESDGE
DGRSLQPRREGPIGGESDSEETFEKTSGFGSGKPSEAGECPTELLRAREGSERLASIRHE
AERLERTVERIITDTDGFTDVPLQGSGSLSGAGVQGAKEEPQLLGTLNARMKAFRKELQA
FLEQVERLGEGLSPLPHLTESSSFLSSVTSVSRDSPVGNLGKELGPGLQSKLRDQLEWQP
GQERGEERGPLHLRATRELHRRADGDAGSCRPGAQSCFNLEVEEGHLCALRRRELEVHSL
ALQNSLQEQTWSDERYLMQRELCFLKQNIFLFYVKLRWLLKHWRQGKQTEEDAEDFTESE
LPETFHRLGEPGVQEDAKVDGPDQDDDGPGCGFSLGEHPPQFGVQIGDHGSRLQPTDGGQ
LHRQVAENQPLFCALKALLEELRVELREDERARRRLQQQYAGDKASWDVEWAALTCRLEQ
LEAKTEKSLGDLGSSADSKGVFMKEREAQQKLLADSHGLVMDLRWQIHHSEKNWNREKVE
LLDRLDRERQEWGRQEKELLWRIEQLQKVNSPRRDGSFLCDQKEGDVHPCAHTGSPWAPH
PTGTWPCMDTDSSTFEDQPLSKLKESDRCSARENLYLDALSLDDEPEEPPDRKPEREFRN
CFPEEEENHKGNLQRAVSVSSMSEFQRLMDGSPFLPEKGLPATSSKEDITPPLSPDDLKY
IEEFNSKSWDDRPPDPWADRTEAGRARPEASTDPFSDSSWYLTTSITLTTDTVTSPEHCQ
KQLPRNLVCAEQAGVRMLHSPPAVRRLDGTVVAGGEGRARGGPGDTKGGCSEHILRWPCA
PSKHTRDYTEGGLWPLDSTLGFSSPLHSLEMSKNLSDDMKEVAFSVSAVCSSPREPPVKD
TACQTNGSRTTGTQTIQTISIGLQTEALRGSAVTSSPHKCLTPKAGGGTTPVSSPSRGLR
NRQVAPAIEKVQAKFERTCCSPKYGSPKLQRKPLPRADQPSSRTSPGLAPKGCGESAWAR
STTTRESPVHTAINDGLSSLFSIIDHSPMVQDPFQKGVRAASRSRSAEPPPELGPGQDTS
PSSRGRSPSPVGGGSETCREEGGEGTPARQDLSAPPGYTLTENVARILHRKLLEHALKEE
QRQATHGTPSLSSNGPVGEMTVRAEPGSIEELPCSALAPSLEPCFSRPERPAKRRPPSRW
APHSPTASPAPSPRDLTSLEELGDEGPPGEKPHL
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atggagacgctgaatggccccgcggccggcggcgccccggatgcgaagccgcagccgccc
ggccagcaccaccgccaccactatctccacccgttggccgagcgaaggcggctgcaccgc
gcgccctcgcccgccaggccatttctcaaggacttgcacggccggcccgcggcccccggc
ccggccgccccttcctcgggccgagccccggcgcccgccgctccgcgctcgcccagcctc
gcaggcaaggcgccgccctcgctggggcccccggccgcgcccggccgcgtctcccggcgc
agcggcggcgcccccggcgcgaaggacaagccgccgccgggcgccggggccagagcagcg
ggcggcgccaaggccgctccgggccccaggaaggcggcgcgcgcggcgcccgccgagccg
ctgccccgggtcgggaagccgccgcccggggccgagccgctgcccgccgctgccaagggc
cgcaaagccaaacgcggctccggtgtggtccccgcccgcgcctccgatccccgggttcct
atcgtcccggtccccgccgtgatcctcgccgtgacccccgcggccggctccccggcccct
ggctcgcgcatcagccacaccgacagcagctccgatctctccgactgcccctccgaccct
ctgtccgacgagcagcgcctgatccccgccgccagcagcgacgccgagtccggcacgggc
tccagcgaccgggaaccccagcggggagcccccacgacgagccccgcggctcggggggcg
cctacgggcagccccgagcccctcccgctcctcgtcgcgccccccgccgcctgcctcggg
ggtcggagcagcccgagcggggtccccgcggggtccccggggcccggcgtggcggaggat
gccggggggtgcgctccgccagagcgaacggtccccgggaaccccaaggagcactgcccg
ggcgagcagccccggctggtaccggcggcggcggcggcggaggagctgctgcgggagatg
gaggagctgcgctcggagaacgactatctcaaggatgagttggatgaactccgtgctgaa
atggaagagatgagagacagttacttagaggaagatgtttaccagctgcaggagcttcgg
cgggaactggaccgcgccaataaaaactgccgaatcctgcagtaccgcctcaggaaggct
gagcagaagagcctgaggtggcagaggaccgggcaggtggatggcgagctcatccgaagt
ctggagcaggacttaaaggtggccaaagatgtgtcggtcaggttgcaccatgaacttgaa
actgtggaggaaaagagagctaaagctgaaggtgagaatgaaactctacgacagcagatg
attgaagtggaaatatccaaacaggccctccaaaacgagctggagagactgaaggagagt
tccctgaagagaagaggcagccgggaaatgtacaaagaaaagaaagccttcgctcagagc
ggtggaacggagcgccttgggaactgcaggtccgcagccagaactcagaggaaactggcg
ccccggcgcaaggatgacagcgccgacctgaggtgccagctccagtttgccaaagaggag
ggctcgctgatgctcaggaagatggccaagctggggcgggagaaggacgggctggaacag
gagctgcagaggtacaaggccctctacggggacgtggacagcccgctccccacgggggag
gccggcgggccgcccagcactcgggaggccgagctgaagctgcggctgaagctggtggag
gaggaagccagcatcttgggccggaagatcgtggagctggaggtggagaaccggggcctc
aaggcggagatggaggacctgcggggccagcatgagcgcgacgccgcgggccgggagccc
ctgcccggcgttccgacctcgcccttcggggactccctggagtcctccgcagagctgcgc
cggcacctgcaattcgtggaggaggaggcggagctgctgcggaggtccatctccgagatc
gaggaccacaaccgacagttgacccacgagctgagcaagttcaagttcgagccgcggccg
gagcccgcgtggccggtggggggcgcgagcggtggagcgcccctgcaggaggagctccaa
gcggcgcggctgcagatcagggagctgagcgggaaggtgctgacgctgcagcatgagaac
caggtgctgctgttgggcgccccacgctgtgacccggccgcgcccccgggcccgcgcgcc
ccaagttcccgcgacagcgacgctgacagcgacgcgggcaagaaagagagcgacggggag
gacggccgctcgctgcagcccaggcgggagggccccatcggcggcgagagcgactcggag
gagaccttcgagaagacgtcgggcttcggcagcgggaagccgtcggaggctggtgagtgc
ccgacagagctgctccgcgctcgggagggctcagagcgcctggcgagcatcagacacgag
gccgagcggctggagcggaccgtggagcgcatcatcaccgacactgacggcttcacggac
gtgccgctgcagggcagtgggtccttgtcgggagccggcgtccagggcgccaaggaggag
ccccagctgctggggaccctcaatgcgaggatgaaggccttcaggaaggagctccaggcc
tttctggagcaggtggagcggctgggggagggcctgtcccctctgccccacctcaccgag
tcttccagcttcctgtcctctgtgacctccgtgtcccgggactcccccgtcgggaacctg
gggaaggagctgggcccgggcctgcagtccaaactgagagatcagctggagtggcagccc
gggcaggagcgaggggaggagcgggggcccctgcacctccgagccacacgggagctgcac
cgtcgagccgacggggacgcggggagctgccggcccggagcccagagctgcttcaacctg
gaggtggaggaggggcacctgtgtgccctgcggcggcgggagctggaggtgcacagcctg
gccctgcagaactcgctgcaggagcagacctggagtgacgagaggtacttgatgcagcgg
gagctatgcttcctgaagcagaacatcttccttttctacgtcaaactcaggtggctgctg
aaacactggcggcaagggaagcagacggaggaggacgcagaggatttcacggagagcgag
cttccagagaccttccacaggcttggggagcctggcgttcaggaggatgcaaaggtggac
ggtccagaccaagatgacgacggtccaggctgtggcttttccctgggggagcatcctcca
cagtttggtgtgcagatcggagaccacggatcacggctgcagcccacagacgggggacag
ctccacaggcaggtggcagagaaccagccgctgttctgcgcgctcaaggcgctgctggag
gagctgcgtgtggagctgcgggaagacgaacgtgcacggcggcggctgcaacaacaatat
gctggcgataaggcctcctgggacgtggagtgggccgcgctcacctgccgcctggagcag
ctggaagcgaagactgagaaaagcttgggagacctgggctcctctgctgacagcaaaggg
gtgttcatgaaggagagggaggcacagcagaagctcctggctgacagtcatgggctggtc
atggacctgcgatggcagatccaccacagcgagaagaactggaaccgagagaaggtagag
cttctcgaccgcctggaccgggagcggcaggagtgggggcggcaggagaaggagctcctg
tggagaatcgaacagttgcagaaagtaaacagtccccggagagatggcagtttcctctgt
gatcaaaaggaaggcgatgtccacccctgtgcccacacggggagcccctgggcaccccac
cccacggggacgtggccctgcatggacactgactccagcacgtttgaggaccagccgctg
tccaagctgaaggaatcggacaggtgctcggcccgggagaatctctacctggatgccctg
tccttggacgacgagccagaggagcctccagaccgcaagcccgagagggagttcaggaac
tgcttccccgaggaagaagaaaatcacaagggaaatcttcaaagggccgtgtccgtctca
tccatgtctgagttccagcgcctgatggatggctctcccttcctgccagagaagggcctg
cccgccaccagcagcaaggaggacatcaccccacccctctccccagatgacctcaagtac
atcgaggagttcaacagcaagagctgggatgataggcccccagacccctgggcggacagg
accgaggcgggtcgggcgaggcccgaggccagcaccgaccctttctccgactcctcctgg
tacctcaccacgagcatcaccctgaccacggacaccgtgaccagcccggagcactgccag
aagcagctcccgcggaaccttgtctgcgccgagcaggccggggtgaggatgctgcacagc
ccgcccgccgtgcggaggctggatggcaccgtggtggcaggcggtgagggcagggcccga
gggggcccgggggacaccaaggggggctgttctgaacacattcttaggtggccctgtgcc
ccctccaagcacacccgagactacacggagggtgggctctggcccctcgacagcaccctc
ggtttctcctccccgctgcacagcctggagatgtccaagaacctgagtgatgacatgaag
gaggtggccttctctgtcagcgctgtctgctccagccccagggaacctccggtcaaggac
acggcctgccagaccaatgggtcccggacaacagggacgcagaccatccagaccatcagc
atcggcctgcagaccgaagccctgcggggcagcgccgtcaccagcagcccccacaagtgt
ctcacacccaaggcagggggtggcaccacgcccgtgtcctctccctcccgcggcctcagg
aacaggcaggtggcccccgccatcgagaaggtgcaggccaagtttgaacgcacatgctgc
tcccccaagtacgggtctcccaagctgcagaggaagcccctccccagagcggaccagcca
agcagcaggacctccccggggctggccccgaagggctgcggcgagtcagcctgggcccgt
tctaccaccactcgggagagccccgtgcacaccgccatcaacgacggcctctccagcctc
ttcagcatcatcgaccacagccctatggtgcaggaccccttccagaagggggtgcgggcc
gccagtcggtctcgttctgcagagcccccgccggagctgggcccgggccaggacacgagc
cccagctcccgaggccggtcgcccagcccggtcgggggtggctcagagacgtgcagggag
gaaggaggagagggcacgcctgcgaggcaggacctgtctgctccccccggctacacgctc
accgagaacgtcgcccggatcctccaccggaagctgttggaacacgccttaaaggaggag
cagaggcaggccacccacggcacccccagtctcagcagcaacggccccgtgggagaaatg
acggtcagagccgagccagggtccatcgaggaactcccttgttctgcactagctccatcc
ctagaaccctgcttctccaggcccgagagaccagcaaagcgtcgccctccgtcccgttgg
gccccacattcccccactgcctcaccagctccgtcacccagagacctgacctccttggag
gagctcggcgacgaggggccgcccggggagaagccacacctgtga
DBGET
integrated database retrieval system
