Phocoena sinus (vaquita): 116765195
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Entry
116765195 CDS
T07759
Symbol
PUS1
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psiu03016
]
116765195 (PUS1)
Enzymes [BR:
psiu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
116765195 (PUS1)
Transfer RNA biogenesis [BR:
psiu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
116765195 (PUS1)
Prokaryotic type
116765195 (PUS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
116765195
NCBI-ProteinID:
XP_032510463
Ensembl:
ENSPSNG00000011984
LinkDB
All DBs
Position
14:88773287..88789824
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AA seq
450 aa
AA seq
DB search
MGLPSLRAAAWALRRACGPWTPRLGPRLLCLPPMAGNGEAPVPVGTKQEQDRKVRRGWQG
AARIWEETEQQAKRLRSSEGGGQHRKLPKRKVVLLVAYSGKGYHGMQRNVGSSKFKTIED
DLVSALVRSGCIPENHGEDMRKMSFQRCARTDKGVSAAGQVVSLKVWLIDDLLEKINSHL
PSHIRILGLKRVTGGFNSKNKCDARTYFYMLPTFAFAHKDHDAQDETYRLHAETLGRVNR
LLACYRGTHNFHNFTSQKGPREPSARRYILDMFCEEPFVREGMEFAVIKVKGQSFMTHQI
RKMVGLVVAIVKGYAPESVLERCWGEAKVDVPKAPGLGLVLERVHFEKYNQRFGHDGLHE
PLDWAREEAEVTAFKEQHIYPTIIGTERHERSMAQWLSTLPMHDFGATAHAAAGPGAKVT
EASGSWRSPMKTPSGPQPLALPVQDRFLNQ
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggggctccccagcctgcgggcggcggcctgggccctgaggagagcctgcggaccgtgg
accccgcgcctgggaccgcgcctcctctgtttgccccccatggcagggaatggggaggcc
cccgtgcccgtggggaccaagcaggagcaggacaggaaggtccggcgtggctggcagggc
gcggccaggatctgggaggagacagagcagcaggcgaaaaggctcaggagcagcgagggt
ggagggcagcacaggaagctgcccaagcgcaaggtcgtgctgctcgtggcctattccggg
aagggctaccacggcatgcagaggaatgttgggtcctcgaaattcaagaccattgaagat
gacctggtgtctgccctggtccggtcgggttgtattcctgagaatcacggggaggacatg
cggaagatgtccttccaacgctgcgcccggacggacaagggtgtgtctgcggccggccag
gttgtgtccctgaaggtgtggctgattgacgaccttttagaaaagattaatagccacctt
ccgtctcacattcggatactgggactgaagagggtcacgggcggcttcaactccaagaac
aagtgcgacgccaggacctacttctacatgctgcccacgttcgcctttgcccacaaggac
cacgacgcgcaggacgagacgtaccggctgcatgcagagacgctggggcgtgtgaaccgg
ctcctggcctgctacaggggcacccacaacttccacaacttcacctcgcagaaggggccc
cgcgagcccagcgcccggcgctacatcctcgacatgttctgcgaggagcccttcgtgcgc
gaaggcatggagtttgcggtgatcaaggtcaagggccagagcttcatgacgcaccagatc
aggaagatggtggggctggtggtggccatcgtcaagggctacgcgcccgagagcgtgctg
gagcgctgttggggggaggccaaggtggacgtgcccaaggcgccggggctcggcctggtc
ctggagcgggtgcacttcgagaagtacaaccagcgcttcggccacgacgggctgcacgag
ccgctggactgggcgcgggaggaggctgaggtcacggccttcaaggagcagcacatctac
cccacgatcatcggcaccgagcgccacgagaggtccatggcccagtggctgagcaccctg
cccatgcatgacttcggcgccaccgcccacgcagccgccggcccaggcgccaaggtcact
gaagcctctgggagctggaggagcccgatgaagaccccatctggtccccagcccttggct
ttgcccgttcaagacaggttcttgaatcagtga
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