Phocoena sinus (vaquita): 116765199
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Entry
116765199 CDS
T07759
Symbol
SBNO1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116765199 (SBNO1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116765199 (SBNO1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
116765199
NCBI-ProteinID:
XP_032510477
Ensembl:
ENSPSNG00000010322
LinkDB
All DBs
Position
14:complement(83112625..83171199)
Genome browser
AA seq
1393 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDGGDAGLATPTPTPPVQQSVPLSALELGLETEAA
VPVKQEPETLPTPALLNVRQQPPSTTTFVLNQINQLPTLGSTIVMTKTPPVTTNRQTITL
TKFIQTTANTRPSVSAPAARNAMTSAPSKDQVQLKDLLKNNSLNELMKLKPPANIAQPVA
TAATDVSNGTVKKESSNKEVARIWINDMKMRSFSPTMKVPVVKEEDEPEEEDEEEMGHAE
TYAEYMPIKLKIGLRHPDAVVETSSLSSVTPPDVWYKTSISEETIDNGWLSALQLEAITY
AAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAE
RDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQ
LLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGAS
EPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTG
VTFKIEEVLLSQSYVKMYNKAVKLWVIARERFQQAADLIDAEQRMKKSMWGQFWSAHQRF
FKYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGV
LQSLIEKHFPAPDRKKLYSLLGIDLTAPSNNSSPTDSPCKENKIKKRKGEEITRESKKAR
KIGGLTGSSSDDSGSESDASDNEESDYESSKNMSSGDDDDFNPFRDESSEDDEDDPWLIR
KDHKKNKDKKKKRSIDPDSIQSALLASGLGSKRPSFSSTPVISPAPNSAPANSNTNSNNS
LITSQDAVERAQQMKKDLLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSN
DDGSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRR
VHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALT
HGDRRATESRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDYPGEFFKDVRQGLI
GVGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFADTLTAVVQNAKKNG
RYDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAELTG
PDDGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLEIYADLKKKYKKVVSD
DALVHWLDQYDSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEG
VLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLINLLSTSDQSQQLAVQQKQLWQ
QRHPQSIANLSNA
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccagggcaagatttactgcttgctgctttgagcgagagtggaattagtccg
aatgacctctttgatattgatggtggagatgcggggcttgcaactccaacacctacccct
cctgtacagcagtcagtgccacttagtgcattagaactaggtttggagactgaagcagca
gttcctgttaaacaagaaccagagacgctacctactccagcactattaaatgttaggcag
cagcctccatctactacaacatttgtgctgaatcaaataaatcagcttccgactttggga
tctacgattgtaatgactaaaacaccacctgtaaccacgaataggcaaaccatcacttta
acaaagttcattcagactactgcaaacacacgtccttcagtctcagcaccagcagcacga
aatgccatgacctctgcaccttcaaaagaccaggttcaactgaaggacctactaaaaaat
aatagtctgaacgaactcatgaaactgaagccaccggctaatattgctcaaccagttgca
acagcagctactgatgtaagcaatggcacagtaaagaaagagtcttctaataaagaagta
gcaagaatatggataaatgacatgaaaatgaggagtttttccccgaccatgaaggtccct
gttgtgaaagaggaagatgaaccagaggaagaagatgaagaagaaatgggtcatgcggaa
acctatgcagagtatatgccaataaaactaaaaattggcctgcgtcacccagatgctgta
gttgaaactagttctttatccagtgttactcctcctgatgtttggtacaaaacgtctatt
tctgaagaaaccattgataatggctggttatcagcattacagcttgaggcaattacatat
gcagcccagcaacatgaaacattcctaccaaatggagatcgtgctggattcttaataggt
gatggtgctggtgtaggaaaaggaaggacaatagcaggaatcatctatgaaaattatttg
ttgagtagaaaaagggctttgtggttcagtgtttcaaatgatttaaagtatgatgccgaa
agagatctgagggatattggagcaaaaaacattttggtccattcattaaataagtttaaa
tatggaaaaatttcttccaaacataatgggagtgtgaagaagggtgtgatttttgctacc
tattcttccctcattggtgaaagtcagtctggtggtaaatacaaaacgaggttaaaacaa
ctcctacattggtgcggtgatgacttcgatggagtgatagtgtttgatgaatgtcataaa
gcaaaaaacttatgtcctgttggttcttcaaagccaaccaagacaggcttagcagtttta
gaacttcagaacaaattgccaaaagccagagttgtttatgctagtgccactggtgcttct
gaaccacgaaacatggcctatatgaaccgtcttggaatatggggtgagggaactccattt
agagaattcagtgattttattcaggcagtagaacggagaggtgttggtgccatggaaata
gttgctatggatatgaagcttagaggaatgtacattgctcgacagctgagctttactgga
gtgaccttcaaaattgaggaagttcttctttctcagagctatgttaaaatgtataacaaa
gcagtcaaactgtgggtcatcgccagagagcggtttcagcaagctgcagatctgattgat
gctgagcaacgaatgaaaaaatccatgtggggtcagttctggtctgctcaccagagattt
ttcaaatacttgtgcatagcatccaaagttaagagggttgttcaactagctcgagaagaa
atcaagaatggaaaatgtgttgtaattggtctgcagtctacgggagaagctagaacatta
gaagccttggaagagggtggaggagaattgaatgatttcgtttcaactgccaaaggagtg
ttgcagtcactcattgaaaaacacttccctgctccagacaggaaaaaactttatagtttg
ctaggcatcgatttgacagctccaagtaacaacagctcaccaacagatagtccttgtaag
gaaaataaaataaagaagcggaaaggtgaagaaataactcgagaatccaaaaaagcaaga
aaaataggtggccttactggtagcagttctgatgatagtggaagtgaatctgatgcctcc
gataatgaagaaagtgactacgagagctctaaaaacatgagttctggagatgacgatgat
ttcaacccatttagagatgagtctagtgaggatgatgaagatgatccctggttaatcaga
aaggaccacaagaaaaacaaagataaaaaaaaaaagagaagtatagatccagattctatt
caaagtgccttattagcatcaggtcttggatcaaaacgacctagtttttcttctacacca
gtaatttcacctgctcctaacagtgcaccagctaacagtaacaccaacagcaacaatagc
cttataacaagtcaggatgccgtggaaagggcccagcagatgaagaaagacctacttgat
aaactagaaaaattagctgaagacctccctcctaataccctggatgaacttattgatgaa
cttggtggccctgagaatgttgctgagatgacaggccgcaaggggagggttgtaagcaat
gatgatggaagtatatcttatgagtcaagatctgaacttgatgtccctgtggaaatacta
aatatcacggaaaaacaaagatttatggatggagataagaatattgctatcatctcagaa
gctgccagctccggtatttcattacaagcagataggagagctaaaaatcaaaggcgaaga
gttcatatgaccctggaattaccatggagtgctgatagagcaatccagcagtttgggcga
actcatagatcaaaccaagttactgctccagaatacgtctttctgatttctgaattggca
ggagaacaaagatttgcatctattgttgctaaaagacttgagagtttgggtgcgcttaca
catggagacagaagagcaacagaatccagagatctgagtaggttcaactttgataataag
tatggaagaaatgctttagaaattgtcatgaaatccattgtaaacctagattctcctatg
gtatcaccacctccagactatcctggagaattctttaaagatgttcgacaaggactaata
ggagttggcctgataaatgtagaagatcgttcaggaattcttactctagataaagattat
aacaacataggaaaattcttaaatagaattttgggcatggaggtgcatcagcagaatgcg
ttatttcagtattttgcagacacacttactgcagttgttcaaaatgccaaaaaaaatgga
agatatgatatgggaatcttagatcttggttctggagatgaaaaagtgaggaaaagtgat
gttaagaagtttctgactccaggatattcaacctctggccatgtagaattatacacgata
agtgtagagaggggaatgtcctgggaggaagctaccaagatttgggctgagttgacagga
ccagatgatggcttttatttgtcattgcaaataagaaacaacaagaaaactgccatctta
gttaaagaagtgaatcctaaaaagaagcttttcttagtttatagaccaaatactgggaaa
cagctcaaattagaaatttatgctgatctaaaaaagaaatataagaaggtagtctcagac
gatgccctggtccactggttagatcagtatgattcatctgcagatacttgcactcatgct
tattggcgtggcaattgcaaaaaagcaagtttgggattagtttgtgaaataggtcttcgt
tgccgcacatactatgtattatgtggctcagtactgagtgtctggacaaaagtcgagggt
gttctcgcatctgtcagtggcacaaacgtgaaaatgcagatagttcggctaagaacagag
gatggacagcggattgtaggtttgatcattcctgcaaattgtgtgtctcctcttataaat
ctcctgtcaacttcagaccagtctcaacagcttgcagtccagcagaaacagctctggcag
cagcgtcacccccagagcatcgccaatttgagcaacgcataa
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integrated database retrieval system
