Pseudomonas silvicola: LZ023_00125
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Entry
LZ023_00125 CDS
T10729
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
psiv Pseudomonas silvicola
Pathway
psiv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LZ023_00125 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psiv03400
]
LZ023_00125 (recC)
Enzymes [BR:
psiv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LZ023_00125 (recC)
DNA repair and recombination proteins [BR:
psiv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LZ023_00125 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WAH58047
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All DBs
Position
complement(30955..34431)
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AA seq
1158 aa
AA seq
DB search
MPANPSITPGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DTLEDDMGGCGIAAAIDVQLPGSFMWQLYRGVLGKDEIPQTSLLDKAPLTWRLMRLLPQL
IDQPHFEPLQRFLTDDNDLRKRYQLAERLADLYDQYQVYRADWLEDWAAGRHQLRNVRGE
AKALPEANCWQAELWRALLHDVGEQGMAQSRAGVHQRFIERINSLEAAPAGLPNRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRHQYKRQARKQGMPAVI
DAEALHQHAHPLLAAWGKQGRDYINLLDSYDDPSSYRAAFREGRIDLFSESEPHTLLAQL
QDDILELRPLAETRGTWPAVNPAKDRSVRFHVAHSAQREVEILHDQLLARFSADPHLRPR
DVIVMVPDVDSYAPHIRAVFGQLDRNDPRFIPFTLTDQNQRGRDPLLIAIEHLLKLPDSR
FAVSEILDLLDVPALRARFGVHEADLPTLHRWIEGAGIRWGLNAAQRAGLGLPEQLEQNS
WRFGLRRMLLGYAVGGGQGYGGIEPYDEIGGLDAALIGPLVGLLDALEVAHQVLSQPAQP
QEWGARLQGLTQVFFQASNEHDDYLLVQLEELREQWLQTCESVGLNDQLPLTVVREAWLA
GLDQGKLSQRFLAGAVNFCTLMPMRAIPFKVVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSAREQLYISWVGRSIRDNSERPASVLIGQLRDHLASGWQLYG
ATEGASLNPGEQLVHSLTLEHPLQPFSSRYFHEGSGLFSFASEWRVLHADQQPLPQDDLL
PSHDQDEPLALTQLQDFLRNPVRHFFSQRLKVFFETAEAPLADEEPFVLDALERYTLSDQ
LLTTAMAVTDDVDGALHGQALRMQGSGLLPMAGFGECLQQELIEPLPDLLQRYQQLLVLW
PTPVIAARPVNFEYQGLRLDGWISGLHQRADGNLLSVTAIANAIGGARSRKWHRLTRAWV
NHLAACAVGLPLTTAVVASDDTLMLAKLAPEQAREVLGHLLLAWQQGMRRPLPVAVKTAF
AWLAQGDPVKAEAAARKAYEGDGITTDGERRESVALARQFPDFNTLVDSEEFEGWCDALY
RPMFEAGWRSIDADEARS
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgccggccaatccctctattaccccaggcttcatggtggttcacggcaaccgtctcgat
gagctgcgcagcctggtggtcagttggatgcggcgctaccctctggcccccttggaaaac
gagatcgccctggtgcagagcaacggtatcgcccagtggctgaagttggccctggccgag
gataccctcgaagacgacatgggcggctgcggtatcgccgccgccattgatgtgcaactg
cccggcagtttcatgtggcagctgtatcgaggggtgctgggtaaggacgaaattccccag
acctctttgctcgacaaggccccgttgacctggcgcctgatgcgcctgctgccgcaactg
atcgaccagccccatttcgagcccctgcagcgcttcctgacggacgacaacgacctgcgc
aaacggtatcagttggccgaacgcctggccgacctgtacgaccagtatcaggtgtaccgc
gctgactggttggaagactgggccgccggccgtcatcagttgcgcaacgtcaggggggaa
gccaaagcgcttcccgaagccaattgctggcaagccgagttgtggcgagcgctgctgcac
gacgttggcgagcaaggcatggcccaaagccgcgccggcgtgcaccaacgcttcatcgag
cgcatcaatagcctggaagctgcaccggcggggttgcccaaccgtgtcatcgttttcggc
atctcttcactgcctgcccaggcgctggaggctctggccgggctggcacggttcagccag
gtgctgctgtgcgtgcacaacccctgtcgccaccactggtctgacatcgtcgccgacaaa
gatctgctgcgtcatcaatacaagcgccaggcccgaaagcagggaatgcccgctgtcatc
gacgccgaggctctgcatcagcatgcacacccgttgctcgccgcctggggcaagcaaggc
cgtgactacatcaacctgctcgatagttatgatgaccctagcagctaccgcgcggcgttt
cgcgaagggcgcatcgacctgttcagtgagagtgagccgcacaccctgctggcccagttg
caggacgacatcctcgagttgcgcccattggcggaaacgcgcggcacctggcctgcggtc
aaccctgccaaggaccgctccgttcgcttccatgtggctcacagtgcccagcgtgaagta
gagatcctccacgaccagttgctggctcgcttcagtgccgacccgcaccttcggcctcgt
gatgttattgtcatggtccccgacgttgacagctatgcgccgcatattcgcgccgtgttt
ggtcagctcgatcgcaacgatccgcgcttcatacccttcaccctcacggaccagaatcaa
cggggtcgagacccgctgctgatcgccatcgagcacctgctcaagttgccagacagccgc
tttgcggtcagcgagatcctcgacctgctggacgttcccgctctgcgagctcgcttcggt
gtgcacgaggctgaccttcccacgctgcaccgctggattgaaggcgcgggtatccgctgg
gggctcaacgctgcgcagcgtgccgggctggggttgcccgagcaactggagcagaacagt
tggcggttcggcttgcggcgcatgctgctgggctatgccgtcggcggtgggcaggggtat
ggcggcatcgagccatatgacgagatcggcgggctggatgctgccctcatcgggcccctg
gtgggcctgctcgacgcgctcgaagtggctcatcaggtactgtcgcaacctgcgcaaccc
caggagtggggggcacggctacagggcctgacccaggtattcttccaggccagcaacgag
cacgacgactacctgctggtacaactcgaagaactgcgcgagcaatggctgcagacgtgc
gagtcggtagggctcaatgaccaactgccattgacggtggtgcgcgaagcctggctggcc
gggcttgaccagggcaagctgtcccagcgcttcctggccggtgccgtgaatttctgcacg
ctcatgcccatgcgcgccattccgttcaaggtggtgtgcctgctgggcatgaacgatggg
gattacccgcgcgcgcaaccaccactggatttcgacctcatgggcagtgactatcgcccg
ggtgaccgctcgcgccgcgaagatgaccgctacctgctgctggaggctttattgtcggcg
cgagagcagctgtacatcagttgggtcggccgcagtattcgggacaacagcgagcgcccg
gcgtcggtgctgatcggccaactgcgcgaccatctggccagtggctggcagctttacggc
gccacggaaggtgcgtcgctcaaccctggcgagcagctggtgcacagccttactctggag
caccccttgcagccgttcagcagccgttatttccatgaaggcagtggcctgttcagtttt
gcctccgaatggcgggtgctgcacgcggaccagcaaccgttaccccaggacgatctacta
cccagccacgaccaggatgagcccctggcactcacgcaattgcaggatttcctgcgcaac
cccgtacggcacttcttcagccagcggttgaaagtgttctttgaaactgccgaggccccc
ctggccgacgaagaacctttcgtgctggacgcgctcgagcgttacaccctcagtgatcag
ttgctgaccaccgcgatggccgtgaccgatgacgtcgatggtgcccttcacgggcaggcc
ttgcgcatgcaaggcagcgggctgctacccatggccggttttggcgaatgccttcagcag
gagctgatagagcctttgcccgacctgttgcagcgctaccagcagttgctggtgctgtgg
cctaccccggtcatcgccgccaggcctgtcaacttcgaataccagggcttgcgcctggat
ggctggatcagcggcctgcaccaacgcgccgacggcaacctgttgagtgtcaccgccatt
gccaatgccattggcggcgcccgttcgcgcaaatggcaccgtctgacccgtgcctgggtc
aatcacctggccgcctgtgccgtggggctgcccctgaccaccgcggtggtggccagcgac
gatacgctgatgctcgccaagcttgctccggagcaggcccgggaagtgctgggccacctg
ttgctggcgtggcaacaaggcatgcgccggccactgccggtcgccgtgaaaaccgcgttc
gcctggctggctcaaggcgacccggtcaaggccgaggccgcggcgcgcaaagcctatgaa
ggcgatggcatcaccaccgatggggaacgccgtgaaagcgtggccctggcccgccaattt
cccgatttcaatacgttggtcgacagcgaagagttcgaaggttggtgcgatgctctgtat
cgcccgatgttcgaagctggctggcgttcaatcgatgccgacgaggcccgctcatga
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