Pseudomonas silvicola: LZ023_00330
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Entry
LZ023_00330 CDS
T10729
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psiv Pseudomonas silvicola
Pathway
psiv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LZ023_00330 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiv03019
]
LZ023_00330 (pnp)
03016 Transfer RNA biogenesis [BR:
psiv03016
]
LZ023_00330 (pnp)
Enzymes [BR:
psiv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LZ023_00330 (pnp)
Messenger RNA biogenesis [BR:
psiv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LZ023_00330 (pnp)
Transfer RNA biogenesis [BR:
psiv03016
]
Prokaryotic type
tRNA degradation factors
LZ023_00330 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_2
KH_N4BP1_2nd
KH_PNO1_2nd
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
WAH58081
LinkDB
All DBs
Position
complement(80601..82706)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDNDVTVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFEGPIGAARVAFHESTGYLLNPTYEQLAASSLDMVV
AGTSDAVLMVESEAKELTEDQMLGAVLFAHDEFQAVINAVKELAAEAAKPTWAWAPQAEA
TELLGAIRAEFGAAISDAYTITVKADRYARLGELKDQVVAKLSGEEGQPSAADVKAAFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAILT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKINGITEEIMEIALGQALEARLNILGQMNQ
IIGKSREELSENAPTMISMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAAKQRVLSITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagaagttccagttcggtcaatcgaccgtcaccctcgagactggc
cgtattgcccgtcaagcctccggcgccgtactggtcaccgtcgataacgacgtcaccgtg
ctggtcaccgttgtaggcgccaagcaagctgatccaggcaagggcttcttcccgctgtcc
gtgcactaccaggaaaagacctatgccgccggcaagatccctggtggtttcttcaagcgc
gaaggccgtccttccgagaaagagaccctgacctcgcgcctgatcgaccgtccgatccgc
cccctgttccctgaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtatcgacc
agcaagaagaccgatccggacatcgctgccatgatcggtacctcggcggccctggccatc
tccggtattccgttcgaaggccctatcggcgccgcccgcgttgcgttccacgaaagcact
ggctacctgctgaaccctacctacgaacaactggctgcctccagcctggacatggtcgtg
gccggtacctccgacgccgtgctgatggttgaatcggaggccaaagagctgaccgaagac
cagatgctgggcgccgtgctgttcgcccacgacgaattccaggcggtcatcaacgccgtc
aaagagctggccgccgaagctgccaagcctacctgggcctgggcacctcaagccgaagcc
accgagctgctcggcgctatccgtgccgagttcggcgcagcgatctccgacgcctacacc
atcaccgtcaaggccgaccgttacgcgcgcctgggcgagctgaaggatcaggtcgtggcc
aagctgtctggtgaagaaggccagccatccgccgccgacgtgaaagccgcattcggcgag
attgaataccgcaccgttcgcgaaaacatcgtcaacggcaagccacgtatcgacggccgt
gacaccaagaccgtgcgcccgctgaacatcgaagtcggtgttctgcccaagacccacggt
tcggccctgttcacccgtggcgaaacccaggccctggtcgtcgcgaccctgggtactgcc
cgtgacgcacagctgctggacaccctggaaggcgagaagaaagaccccttcatgctgcac
tacaacttccctccgttctcggtgggcgagtgtggtcgcatgggcggtgctggccgccgc
gaaatcggccacggccgtctggcccgtcgttcggttcaggccatgctgcctgctgctgac
gaattcccgtacaccatccgcgtcgtgtcggaaatcaccgaatccaacggctcgagctcc
atggcttccgtctgcggtgcttccctggccctgatggacgctggtgtgccgatgaaggct
ccggttgccggtatcgccatgggcctggtcaaggaaggcgagaagttcgccattctgacc
gacattctgggtgacgaagaccacctgggcgacatggacttcaaggtagccggtactgcc
aagggtgtgactgccctgcagatggacatcaagatcaacggcatcaccgaagagatcatg
gaaatcgccctgggccaggccctggaagcgcgcctgaacatcctcggccagatgaaccag
atcatcggcaagtcgcgtgaagagctgtcggaaaacgctccgaccatgatctccatgaag
atcgacaccgacaagatccgtgacgtcatcggtaaaggcggcgccaccatccgcgctatc
tgcgaggaaaccaaggcctcgatcgacatcgaagacgatggctcgatcaagatcttcggc
gaaaccaaggaagcggccgaggcggccaagcagcgcgtgctgtcgatcactgccgaagct
gaaattggcaagatctacgtcggcaaggttgagcgcatcgtcgacttcggcgctttcgtc
aatatcctgcctggcaaggacggcctggttcacatctcgatgctgagtgacgctcgcgta
gagaaggtgaccgacatcctgaaagaaggccaggaagttgaagtactggtattggacgtg
gacaaccgcggccgtatcaagctgtccatcaaggacgtcgccgctgcaaaggcttcgggt
gtgtaa
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