Pseudomonas silvicola: LZ023_00345
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Entry
LZ023_00345 CDS
T10729
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psiv Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psiv03016
]
LZ023_00345 (truB)
Enzymes [BR:
psiv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LZ023_00345 (truB)
Transfer RNA biogenesis [BR:
psiv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LZ023_00345 (truB)
Prokaryotic type
LZ023_00345 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PUA_3
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WAH58084
LinkDB
All DBs
Position
complement(83346..84263)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETVMQMGQTTTTADAEGEVLRTRDVTVGRDDIEAVLPRFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTIDRLELLAFDDTRARLSVACSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELERVHAEGGNEAVDQFLMPSDS
GLLDWPLLQFSEHSAFYWLHGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatccgtcgtaacgtcagcggcatcatcctgctggacaagccg
ctggggttcacctccaacgcggccctgcagaaggtccgttggctgctcaatgccgaaaag
gccggccacaccggcagcctcgaccccttggccaccggcgtgctgccgctgtgcttcggt
gaggccaccaagttctcccagtacctgctcgattccgacaagggctacgagacggtgatg
cagatgggccagaccaccaccacggccgacgccgaaggtgaggtgttgcgtacccgagat
gtaaccgttggtcgcgacgatatcgaagcggttttgccacgatttcgtggtcaaatcagt
cagataccgccgatgtactccgccctcaagcgtgatggccagccgctttacaagctggcg
cgtgcaggggaagtagtggagcgcgaggcgcgttctgttactattgaccggttggaattg
ctggccttcgatgacacccgcgcacggttgtcggtagcgtgctccaaaggcacgtatatc
cgtaccctggtggaagacatcggtgagcaattgggctgtggcgcgtacgtcgctgaactg
cgtcgcacccaggcaggccccttcacgctggcccagacggtcaccctcgaagagctcgag
cgtgtgcatgccgagggtggcaacgaggcggtcgaccagttcctcatgccttcggacagc
ggcctgctggattggcccctgttgcagttctccgagcacagtgcgttctactggctgcac
ggacaaccggtaagagccccggacgcgccgaaattcggcatggtacgggtgcaggatcac
aacggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccacgtcgc
ttgattcggtcagaatga
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