Pseudomonas silvicola: LZ023_00360
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Entry
LZ023_00360 CDS
T10729
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
psiv Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psiv03021
]
LZ023_00360 (nusA)
03009 Ribosome biogenesis [BR:
psiv03009
]
LZ023_00360 (nusA)
Transcription machinery [BR:
psiv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LZ023_00360 (nusA)
Ribosome biogenesis [BR:
psiv03009
]
Prokaryotic type
rRNA transcription factors
LZ023_00360 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
RNA_pol_A_CTD
DUF2187
Motif
Other DBs
NCBI-ProteinID:
WAH58087
LinkDB
All DBs
Position
complement(87307..88788)
Genome browser
AA seq
493 aa
AA seq
DB search
MSKEVLLVVESVSNEKGVPAGVIFEALEIALATATKKRFEDEVDLRVEINRHTGAYETFR
RWAVVEDEDLDDPAIELAVDQAQAKKPGAVAGDVIEEKIESIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYRERLGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIISRETFRVGVR
LRALLKEIRTENRGPQLILSRTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQQAETGDILRN
FIDELEVDEELAQVLVDEGFTSLEEIAYVPLEEMLNIDGFDEDIVNELRARAKDRLLTKA
IATEEKLADAHPAEDLLSLEGMDKDLAMELAVRGVITREDLAEQSIDDLLDIDGIDDDRA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgttgagtcggtatccaacgaaaagggtgtaccggcc
ggcgtaatattcgaagcgcttgagattgctctggcaaccgctaccaagaagcgcttcgaa
gatgaagtggacctgcgtgtggaaatcaaccgccacaccggtgcctatgaaaccttccgt
cgctgggcagtggtcgaggatgaagacctggacgacccggcgatcgaattggccgtcgac
caggcccaggccaagaagccgggcgccgttgccggtgacgtgatcgaagagaagatcgag
tcgatcgaattcggtcgcattgccgcacaaaccgccaagcaggtgattgtccagaaagtt
cgtgaagccgagcgcgcccaagtggttgacgcttaccgcgagcgcctgggtgaaatcatc
tccggtaccgttaaaaaggttacccgtgacaacgtcatcgtggaccttggcaacaacgcc
gaagccctgctggcccgcgaggacatcatttctcgcgaaactttccgagtgggtgtgcgc
ctgcgtgccctgctcaaggaaatccgcaccgagaaccgcggtccgcagctgattctgtcg
cgtacagcgccagaaatgctgatcgaactgttccgcatcgaagtgccggaaattgccgaa
ggcctgatcgaagtgatggctgcgtcccgtgacccgggttcgcgtgccaagattgcggtc
cgctccaaggacaaacgcatcgacccacaaggtgcctgcattggtatgcgcggttcgcgc
gtccaggcggtatcgggtgaattgggcggtgagcgtgtggatatcgtcctgtgggatgac
aaccccgcgcagttcgtgatcaacgcgatgtccccagctgaagtggcggcgatcattgtc
gacgaagatgcccatgcaatggacatcgccgtcggcgctgacaatctggctcaggccatt
ggtcgtggtggtcagaacgtgcgtctggccagccagttgactggctggaccctgaacgtg
atgaccgaatcggacatccaggccaagcagcaagcggaaaccggcgacatcctgcgcaac
ttcatcgacgagctggaagtcgacgaagaactggcccaggtgctggtggacgaaggcttc
acaagcctggaagagattgcctacgtaccgttggaagaaatgctcaacatcgacggcttt
gacgaggatatcgtcaacgagcttcgcgctcgggccaaggatcgactgttgaccaaagcc
atcgctactgaggaaaagctggcagacgcccatccggccgaagacctgctctcgcttgag
ggtatggacaaggatttggcgatggaactggcggtgcgcggcgtgattacccgcgaagac
ctggccgagcagtctattgatgacctgctcgacatcgacggcattgacgatgatcgtgcc
ggcaagttgatcatggccgcccgagcccactggttcgagtaa
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