KEGG   Pseudomonas silvicola: LZ023_00545
Entry
LZ023_00545       CDS       T10729                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
psiv  Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:psiv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:psiv02048]
    LZ023_00545
Enzymes [BR:psiv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LZ023_00545
Prokaryotic defense system [BR:psiv02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LZ023_00545
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD DraIII
Other DBs
NCBI-ProteinID: WAH58121
LinkDB
Position
complement(126384..129491)
AA seq 1035 aa
MSTVGQIEKMTQQRVAKLFQQELGYEHLGDWSERPNNANIEAELLRGWLLEQGVEANPAS
RAVLELNKAANDASKGIYDRNKAVYELLRYGVKIKPEVGENTQTVWLIDWKQADKNHFAI
AEEVTVKGADAKANTKRPDIVLYVNGIALGVLELKRSKVAVNEGIRQNLDNQKAEFIQPF
FSTMQYVMAGNDTQGLRYGTIQTGEKYYLTWKEENADSSGANNLLDRHLLQLCNKTRFLE
LIHDYIVFDSGVKKLCRHNQYFGVREAQRYLRRREGGIIWHTQGSGKSLTMVWLTKWIRE
NIQDSRVLIITDRTELDEQIEKVFTGVNEQIYRTTSGADLINKLNQPSPWLLCSLIHKFG
AREDADVEGFVEELRKSLPPDFSAKGDLYVFVDECHRTQSGELHKAMKAILPNAVFIGFT
GTPLLKADKQKSIEVFGRYIHTYKFNEAVADGVVLDLRYEARDIDQNITSQKKIDQWFDA
ATKALNDLAKAQLKQRWGTMQKVLSSQSRLEKIVADIMLDMAIKPRLADGRGNAMLVTSS
IFEACKCYELFSKLDMGEKCAIITSYKPSPADIKGETTGEGLTEKLRQYAIYNQMLGDKD
PETFEKEVKQRFIKEPGQMRLLIVVDKLLTGFDAPSATYLYIDKQMRDHGLFQAICRVNR
LDREDKQYGYIIDYKDLFKQLEGAIGDYTSGALDGYDKADVAGLLEDRLGKAQEDLEDAR
EAIKALCEPVEQPKDTPAYLRFFCGTASGNAEQLKANEPKRLNLYKMTSALIRCFGNIAN
ELEEAGYSSKEIIEVHAEVDHFSKVRDEVKLASADYIDLKVYEPGMRFLIDTYIRAEDSE
KVSAFEDMSLIELIVERGMGAIDALPKGIRESQEAVAETIENNVRKLIIDESPINPKYYE
TMSSLLDALIAKRKENAISYQQYLAEVVKLTKQAKNSTSTNSYPGSINSNARKALYDNLG
QDAGLALALDAAVLDSRQDDWRGNAMKIKRVRLAIKNALNQWGKDAAKALGSDSLGQDNE
RLEALLELVKHQHEY
NT seq 3108 nt   +upstreamnt  +downstreamnt
atgagcaccgttggccagatcgaaaaaatgacccagcaacgcgtggccaagctgttccag
caggagctgggctatgagcacctcggtgactggtccgagcgcccgaacaacgccaatatc
gaagcagagttgctgcgtggctggttgcttgagcagggtgtggaggcaaatccggccagc
cgagctgtcctcgagctgaacaaggccgccaacgatgccagcaagggcatttatgaccgc
aacaaggcggtatatgaactgctgcgctatggggtgaagatcaagcctgaggtgggcgag
aatacccagaccgtctggctgatcgactggaaacaggctgacaagaaccacttcgcaatt
gccgaggaagtcaccgtcaagggagctgatgccaaggccaataccaagcgcccggacata
gtgctctatgtgaatggtattgccctaggcgtactagaactgaagcgttccaaggtggcg
gtgaacgagggcatccggcagaacctggacaatcagaaggccgagtttatccagccgttc
ttttcgaccatgcagtatgtgatggccggcaacgatacccaaggcctgcgctacggcacc
atccagactggcgagaagtactacctcacctggaaagaggaaaacgcggacagctccggt
gccaataatctgctggatcggcatttgctccagctgtgtaacaagacgcgctttctggaa
ctgatccacgactacatcgtgttcgacagtggcgtgaaaaagctctgccggcataaccag
tacttcggcgtccgcgaggcacagcgctacctgcgtcggcgcgagggtggaatcatctgg
cacacccagggctcgggcaaatccctaaccatggtctggctgaccaagtggattcgggaa
aacatccaagattcgcgggtactgatcatcaccgaccgcaccgagctggatgagcagatt
gagaaggtatttaccggcgtcaacgagcagatttaccgcactaccagcggtgccgacctg
atcaacaagctcaaccagccttcgccttggctgctgtgctcgctgatccacaagttcggt
gcccgcgaagatgccgacgtggaaggctttgtggaagagcttcgcaagagcctgccaccg
gacttcagcgccaaaggcgatctctatgtgtttgtcgacgagtgccaccgcacccagtcc
ggcgagttgcacaaggcgatgaaagccatcctgcccaatgcggtgtttatcggtttcacc
ggtacaccgctgctcaaggcggacaagcaaaagagtatcgaggtatttggccgctacatt
cacacctacaaattcaatgaagcggtggccgatggcgtggtcctcgacctgcgttacgaa
gcccgcgacattgaccagaacatcacgtcacagaagaaaattgatcagtggttcgatgct
gcaaccaaggcgttgaatgatctggccaaggcccagctcaagcagcgctggggcaccatg
cagaaggtgctgtcgagccaatcgcgactagagaagatagtcgcggacatcatgctggat
atggccatcaagccgcgcctggccgatggccggggcaatgccatgctggtgaccagcagc
atcttcgaggcctgcaagtgctatgagcttttcagcaagctagacatgggcgaaaaatgc
gccatcatcaccagttacaaaccgtcgcctgccgacatcaagggcgagaccactggcgaa
gggctgaccgagaagctgcgccagtacgccatctacaaccagatgttgggcgacaaagac
ccggaaaccttcgagaaagaggtcaagcagcgtttcatcaaagagccagggcagatgcgc
ctgctcatcgtggtggacaagctgttgaccggtttcgacgcgccttcggccacctacctt
tatattgacaagcagatgcgcgaccacggcctattccaggccatctgccgggtcaaccgc
ctcgatcgtgaggacaagcagtacggctacattattgactacaaggacttgttcaagcag
ctggagggtgccattggcgactataccagcggcgcgctggatggttacgacaaagctgac
gtggccgggctgctggaagaccgcctgggcaaggcgcaggaagatctagaagacgcccgc
gaagcgatcaaggccctgtgcgaacccgtggagcagcccaaggacacgccggcatatctg
cgcttcttctgtggcaccgcctcgggcaatgccgagcagctcaaggctaacgaacccaag
cgcctgaacctgtacaagatgacctcggcgctaatccgttgcttcggtaatatcgccaac
gagcttgaggaagcgggctacagctccaaggaaatcattgaagtccacgccgaggtggat
catttctccaaggtacgtgatgaggtgaagctcgctagcgctgattacatcgaccttaaa
gtctatgaacctggcatgcgctttttaatcgacacctacattcgcgctgaggacagcgag
aaggtttccgccttcgaggatatgtcgctgatcgagctgattgtcgagcgtggcatggga
gccatcgacgcgctgcccaagggcatccgcgaaagtcaggaggccgtcgccgagaccatc
gagaacaacgtgcgcaagttgatcatcgacgagtcgccgatcaacccgaagtactacgaa
accatgtcctcgctgctcgatgcactgatcgccaagcgtaaggaaaacgccatcagctac
caacaatacctcgccgaagtggtaaagctgaccaaacaggcgaagaactccaccagcacc
aacagctaccccggctcgatcaatagcaacgcccgcaaggccctatatgacaacttggga
caggacgccggcctggcattggccttagacgctgccgtactagatagccggcaggatgac
tggcgcggcaatgccatgaagatcaagcgcgtgcgcctggccatcaagaacgcgctgaat
cagtggggcaaagacgccgctaaagccttgggcagcgactcgctgggacaggacaacgag
cggctggaagccttgttagaactggtcaagcatcagcatgagtactga

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