Pseudomonas silvicola: LZ023_03480
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Entry
LZ023_03480 CDS
T10729
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
psiv Pseudomonas silvicola
Pathway
psiv02025
Biofilm formation - Pseudomonas aeruginosa
psiv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LZ023_03480 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LZ023_03480 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psiv02044
]
LZ023_03480 (tssH)
Secretion system [BR:
psiv02044
]
Type VI secretion system
Imp/Vas secretion system core components
LZ023_03480 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
nSTAND3
Sigma54_activat
Zeta_toxin
AAA_25
TniB
AAA_7
AAA_14
ATPase_2
NACHT
AAA_18
T2SSE
Clp_N
Torsin
CbiA
Hpr_kinase_C
SRP54
ABC_tran_CTD
NBD_SMAX1
Cyclin_N
Motif
Other DBs
NCBI-ProteinID:
WAH58662
LinkDB
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Position
complement(789099..791765)
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AA seq
888 aa
AA seq
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MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQF
NLDSARVAQGLTEALDRLPRGSTSITDLSSQVEESVERGWVYGSLMFGESQVRTGYLVIG
ILKTPSLRHALLGLSAEFDKLKVESLSERFDEYVGDSPENALAATDGFTSAAPGEASGAI
APSALGKQEALKRFTVDLTEQARSGKLDPIVGRDDEIRQLVDILMRRRQNNPILTGEAGV
GKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQASP
KPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPALT
RRFQVVQVAEPSEANALLMMRGVASTMEKHHQVQVLDEALEAAVKLSHRYIPARQLPDKS
VSLLDTACARVAISLHAVPAEVDDSRRRIEALETEQAIIAREYAVGVDVSQRQAAVDDAL
GTERARLAELEGRWSEEKALVDELLMLRASLRESAGVVDSEDGHHALRAQLRDVQRRLGE
LQGETPLILPTVDYQAVAAVVADWTGIPVGRMARNEIETVLKLDQLMAKRIVGQDHALKM
IAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEALYGGEQNIITINMSEFQE
AHTVSTLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDKGVM
EDGEGRLIDFKNTLILLTTNAGTETIATLCQPGRAAPDPDDIAKALRPSLLEIFPPALLG
RLVSIPYYPLSDDMLKAITRLQLDRIKRRVESTHKVGFEYDDAVVDQIVSRCTENESGGR
MIDAILTNSLLPDMSREFLTRMLEGQPLAGVRIGVRDGDLQYDFGSSH
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagccgcgccgcgctgttcggcaaactcaacagcgtggcctacaaggct
atcgaagccgccaccgtattctgcaagctgcgcggcaacccctatgtggagctggcgcac
tggttccaccagttgctgcaactgcaggacagcgacctgcaccgtatcattcgccagttc
aacctggattcggcacgtgttgcccagggcctgaccgaagccctggaccgcttgccccgt
ggctcgacgtcgatcaccgacctgtcctcgcaagtcgaggagagtgtggagcgcggctgg
gtgtacggcagcctgatgttcggtgaaagccaggtgcgcaccggctatctggttatcggt
attctcaagaccccgagcctgcgccacgcgctgctgggcctgagtgccgagttcgacaag
ctcaaggtggagagcctgagcgagcgcttcgacgaatacgtgggcgactcgccggaaaat
gccctggcggctaccgatggcttcacctcggcggcgccgggggaggccagcggcgccatt
gcccccagcgcgctgggcaagcaggaagcactcaagcgctttaccgtcgacctcaccgag
caggcgcgaagtggcaagctcgaccctatcgtggggcgcgacgacgaaatccgccaactg
gtggatatcctcatgcgtcgccgccagaacaatcccatcctcacgggggaggccggtgtg
ggcaagaccgccgtggtcgagggctttgccttgcgcatcgttgccggtgacgtaccgccc
gcgctcaaggacgtggaactgcgcagcctggacgtaggcctgctgcaagccggtgccagc
atgaaaggcgagttcgaacagcgcctgcgtcaggtcatcgaagacgttcaggcctcgccc
aagccgatcatcctgttcatcgacgaagcccacaccctggtcggtgccggtggcgccgcc
ggcaccggcgatgctgccaacctgctgaaaccggcgctggcccgcggcaccctgcgcact
gttgccgccactacctgggcggagtacaaaaaacacatcgaaaaagacccggccctgacc
cgtcgcttccaggtggtgcaggtggccgagccttccgaggccaatgccttgctaatgatg
cgcggggtggcctcgaccatggaaaaacaccatcaggttcaggtactcgacgaagccctg
gaggccgcggtcaagctgtcccatcgctacattcccgcgcgccagttgccggacaaatcg
gtcagcctgctggacaccgcctgtgcccgcgtcgccatcagtctgcacgcggtacccgcc
gaggtggatgacagccgccggcgtatcgaagcgctggaaaccgagcaggccatcattgcc
cgcgaatacgccgtgggcgtggatgtcagccagcgccaggccgcggtggacgatgcgctc
ggcactgagcgcgcgcggctggccgagctggaaggccgatggagcgaagagaaggccctg
gtggacgagttgctgatgctgcgtgccagcctgcgtgaaagcgccggtgtggtagacagc
gaagacggccaccatgccctgcgcgcccagttgcgcgatgtgcaacgacgcttgggtgaa
ctgcagggcgaaacaccattgattctgcctactgtcgactaccaggccgtggccgcggtg
gtcgccgattggaccggtattccggtggggcgcatggcacgcaatgaaatagagacggtg
ctcaagctcgatcagctcatggccaagcgcatcgtcggccaggaccacgccctgaagatg
atcgccaaacgcatccagacatcccgcgccgggctcgacaatcctagcaagccgattggc
gttttcatgctcgccggcacatctggcgtgggcaagaccgaaacggccctggccctggcc
gaggcgttatatggcggtgagcagaacatcatcaccatcaacatgagcgaattccaggag
gcgcataccgtgtccaccctcaagggcgcaccgcccggttacgtgggctatggcgaaggc
ggcgtgctgaccgaagcggtacggcgcaagccctacagcgtggtgctgctggacgaggtg
gaaaaagcccaccccgatgtgcatgagatctttttccaggtcttcgacaagggggtgatg
gaagatggtgaaggccgcttgatcgacttcaagaacaccttgatcctgctgaccaccaac
gccggcaccgaaaccatcgccaccctttgccaaccggggcgtgccgcgccggacccggac
gatatcgccaaggccctgcgcccgtcgttgctggaaatcttcccgccggctttgctgggt
cgcctggtgagcattccgtactacccgctcagcgacgacatgctcaaggccatcacccgc
ctgcaactggaccgcatcaagcggcgcgtggaaagcacccacaaagtagggttcgagtat
gacgacgcggttgtcgaccagatcgtctcgcgctgcaccgagaacgaaagtggtgggcgc
atgatcgatgccattctcaccaacagcctgctgccagacatgagccgtgagttcctcact
cgcatgctcgaaggccagccgctggctggggtgcgtatcggtgttcgtgatggcgacttg
cagtacgacttcggtagcagccactga
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