Pseudomonas silvicola: LZ023_03540
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Entry
LZ023_03540 CDS
T10729
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
psiv Pseudomonas silvicola
Pathway
psiv02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LZ023_03540 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psiv02044
]
LZ023_03540 (tssK)
Secretion system [BR:
psiv02044
]
Type VI secretion system
Imp/Vas secretion system core components
LZ023_03540 (tssK)
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
PADRE
Motif
Other DBs
NCBI-ProteinID:
WAH58672
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Position
803926..805260
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AA seq
444 aa
AA seq
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MSWNNRVVWSEGMFLRPQHFQQHDRYLETLIDARSRPFVAGSWGFSELLVDQALLGQGKL
AILSARGLLPDGTPFNIPADDPAPAPLDIDEHLRDGLVYLALPLKRAGVRDTVEEGEAAG
AARYQSQVREVRDDNAPFENRAPVAVGNRALRLLTDQDGLDDQAALGVVRVVEKRADRAL
VLDERYIPPVLDVAASKVLSAFTRELQGLLHQRGEALGGRVVASNAGGASEIADFMLLQL
VNRAQPLVAHLARLSPLHPERLYSELVSLAGEFATFASDNRRPEDFGLYQHDNLAPSFEP
VMLALRAALSMLMDSKATPIPIVEKAYGVHVAMLADRTLIDNASFILVVRADVPGETLRG
RFAQQSKVGSVEHIRDLVNLQLPGIGLLPLPVAPRQLPYHAGSTYYELDRGSEHWQQLRQ
SGGFAFHIAGQFPGLDLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaacaatcgagtggtgtggtcggaggggatgttcctgcgcccgcagcatttc
cagcagcacgaccgctatctggaaaccctgatcgacgcccgcagccggccattcgtggcg
ggtagctggggtttctcggagttgctggttgaccaggcattgctgggccaaggcaagctg
gcgatcctcagtgcccgcggcctgctgcccgacggcacaccgttcaacattccggcagat
gacccggcgccagcgcccctggatatcgacgaacacctgcgcgacgggctggtttacctg
gccttgccgctcaagcgcgcaggcgtgcgcgacactgtggaggaaggcgaggccgcaggt
gcggcgcgttatcagagccaggttcgcgaagtgcgtgacgataatgcccccttcgagaac
cgcgcccccgtggccgttggcaaccgcgccttgcgcctgctgaccgatcaggatggcctg
gacgaccaggccgcgctgggcgtggtgcgggtggtggaaaagcgtgccgaccgcgcgctg
gtgctggacgagcgctacatcccgccggtactggatgtggccgccagcaaagtgctaagc
gcctttacccgggaactgcaaggcctgctgcatcagcgtggcgaagcgttgggcggccgg
gtggtggccagcaacgccggtggcgcctcggaaatcgccgatttcatgctgctgcaactg
gtcaaccgcgcccagcctctggtcgcccatcttgcacgcttgagccccctgcaccccgag
cggctgtacagcgagctggtcagcctggccggcgaattcgccacgtttgccagcgacaac
cgccgccccgaagacttcgggctataccagcacgacaacctggcgccgagtttcgagccg
gtgatgctcgcgttgcgtgccgcgctctcgatgctgatggacagcaaggccacgccgatt
cctatcgtcgagaaagcttatggggtgcacgtggcgatgctcgccgaccgcaccctgatc
gacaacgccagcttcattctggtggtgcgcgccgacgtacctggggaaaccctgcgcgga
cgcttcgcccagcagagcaaggtagggtcggttgagcacatccgcgacctggtgaacctg
caactgcccggcatcggcttgctgccgttgcccgtggccccgcgccaactgccctatcac
gccggctccacttactacgaactggaccgcggcagcgaacactggcagcaattgcgccaa
tcgggcggctttgccttccacatcgccgggcagttcccgggcctggacctggcgttctgg
gcgatacgagggtaa
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