Pseudomonas silvicola: LZ023_03765
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Entry
LZ023_03765 CDS
T10729
Symbol
algB
Name
(GenBank) sigma-54-dependent response regulator transcription factor AlgB
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
psiv Pseudomonas silvicola
Pathway
psiv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LZ023_03765 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psiv02022
]
LZ023_03765 (algB)
Two-component system [BR:
psiv02022
]
NtrC family
KinB-AlgB (alginate production)
LZ023_03765 (algB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
Mg_chelatase
VpsR
AAA_2
cREC_REC
AAA_22
HTH_23
HTH_29
AAA_16
AAA_19
MCM
Xre-like-HTH
HTH_50
nSTAND3
DUF815
HTH_17
Motif
Other DBs
NCBI-ProteinID:
WAH58706
LinkDB
All DBs
Position
855277..856623
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AA seq
448 aa
AA seq
DB search
MEAGTEHQGRILLVDDESAILRTFRYCLEDEGYSVATANSAAQADALLQRQVFDLCFLDL
RLGEDNGLDVLAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLAT
AKQLEVRQLSARLEALEGEVRKPKDGLDSHSPAMMVVLETARQVAGTDANILILGESGTG
KGELARAIHGWSKRSKKACVTINCPSLTAELMESELFGHSRGAFTGASESTLGRVNQADG
GTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVREGRF
REDLLYRLNVITLHLPPLRERSEDILILADRFLARFVKEYARPARAFSEEARAALLNYRW
PGNIRELRNVVERASIICAQERVEVSHLGMAEQPVNNAPRIGAALSLDELEKAHIGAVLA
TSDTLDQAAKTLGIDASTLYRKRKQYNL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaagctggcacggaacatcaaggccgaatcctgttggtggacgatgaatccgccatc
cttcgcaccttccgatattgcctggaagacgaaggctacagcgtcgccaccgccaacagc
gcggcgcaggccgacgcactgctgcagcgccaggtgttcgacctgtgctttctcgacctg
cgcctgggcgaagacaacggcctggacgtattggcgcaaatgcgcattcaggcgccgtgg
atgcgggtcgtcatcgtcaccgcccactcggcggtggataccgccgtggatgccattcag
gccggcgccgccgattacctggtaaaaccctgcagccctgaccaactgcgcctggccacg
gccaaacagctggaggtacgccagctttcagcgcgcctggaagcgctggaaggcgaagtc
cgcaaacccaaggacggcctggactcccacagcccagccatgatggtggtgctggaaacc
gcacgccaggtggcgggcaccgacgccaacattcttatcctgggcgagtcgggtaccggt
aaaggcgaactggcccgtgccattcacggttggagcaaacgctccaagaaagcctgcgtg
accatcaactgtccttcgctgaccgccgaactgatggaaagtgaactgttcggccacagc
cgtggcgcgttcaccggcgccagcgaaagcacccttgggcgggtcaaccaggcagacggc
ggcaccctgttcctcgatgagatcggcgatttccccctgacactgcaacccaagctgctg
cgcttcattcaggacaaggaatacgagcgggtcggtgacccggttacccgtcgggcggac
gtgcgcatcctggcggccaccaacctcaacctggaagacatggtgcgcgagggtcgcttc
cgcgaagacctgctgtaccgcctcaatgtcatcaccttgcaccttccgcccctgcgcgag
cgcagcgaggacatcctgattctggccgaccgcttcctggcccgcttcgtcaaggaatac
gcgcgccccgcccgggccttcagcgaggaagcccgcgctgcgctgctgaattaccgctgg
cccgggaatatccgcgaattgcgcaacgtggtggaacgcgcaagcatcatctgcgcccag
gagcgggtagaggtgagccacctgggcatggccgagcaacctgtcaacaatgccccgcgc
atcggcgctgcgttgagcctggacgaactggaaaaagcccacatcggcgccgtgctggcc
accagcgatacgctggaccaggcggccaagaccttgggcatcgacgcgtccacgctgtac
cgcaaacgcaaacagtacaacctgtga
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