Pseudomonas silvicola: LZ023_03775
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Entry
LZ023_03775 CDS
T10729
Name
(GenBank) EAL domain-containing protein
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
psiv Pseudomonas silvicola
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LZ023_03775
Enzymes [BR:
psiv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
LZ023_03775
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Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
CSS_CxxC
Ddi2_HDD
NYD-SP28
Motif
Other DBs
NCBI-ProteinID:
WAH58708
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Position
complement(858430..860049)
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AA seq
539 aa
AA seq
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MSPAFVRFRSALYRPWLLATVAALACAALLLSASLGLIMHQVQQTEIEQMNARGERFLDR
LEQIFGQLRESVDDLDEQSVRGCSPQMLAVLQQVGFDNRFVYDAAYSDGQEHCSSRPSEQ
NADALRAPDIKGPTYSYWLNTSTQPDDNLAALRLARGPFTVSTSRGHLTDVVDLAPGGSL
LVVLDKGTRAVPVLGPVQAWPPSADWPPPAQQPLVVTHDSLIYRMFTKSPDYQLVLISPR
TSVLPKMNQALWALFPASLLLSWCVGWIVLQQVRERRSMSAELQGALRRGELKVLYQPIF
DLNSRRCVGAEALVRWRRPDGTLTSPDLFIPMAENTGQIREITDFVLQQLLEQLGQLLRA
NPHLYISVNLAACDVMVPRIGRVVARLLDQYRVAANQIAFEVTERGLIDVVVARDNLQAL
RDVGHQVLIDDFGTGYCSLAYLQTLPVDCLKIDKAFIDALGHDAASSGVAPHIIRMAHAL
QLRVIAEGIEFEAQALLLSSEGVNYGQGWLFAHPLNARQFSELVTRGRRLVGRRLDDEA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccgccttcgtgcgttttcgcagcgctttgtatcgtccctggctattggcgaca
gtagctgcgttggcgtgcgcggcattgctgctcagcgccagcctggggctgatcatgcac
caggttcagcaaaccgaaatcgagcagatgaatgcccgtggcgaacgttttctcgaccgc
ctggagcagatattcggccagttgcgcgaaagcgtggatgacctcgatgagcagagtgtg
aggggctgcagcccgcagatgctcgccgtgttgcagcaggttggtttcgataaccgcttc
gtctacgacgcggcctacagcgatggtcaggaacactgttccagccgccccagcgagcag
aatgccgacgcgctgcgggcccccgacatcaagggccctacctacagttactggctgaac
accagcacccagccggacgacaatctggctgccctgcgcctggcccgtggcccgttcacg
gtgtccacttcccgcggccacctgaccgacgtggtggacctggccccaggcggcagcctg
ctggtggtgctggacaagggcacccgtgcggtccccgtgctgggtccggtgcaggcctgg
ccgcccagcgccgattggccaccgcccgcgcagcagccgttggtggttacccatgactcg
ctgatctaccgcatgttcaccaaatccccggattaccagctggtattgatctcgccgcgc
accagcgtgctgccgaagatgaaccaggcgctgtgggccctgttccccgccagcctgctg
ctgtcctggtgcgtgggctggatcgtgctgcagcaggtgcgcgagcgccggtccatgagc
gccgagctgcagggtgcgctgcgccgcggcgaactgaaggtgttgtaccaacccatcttc
gacctcaacagccgacgatgcgtgggtgcggaggcgctggtgcgctggcgccgcccggat
ggcaccctgaccagcccggacctgttcattcccatggctgaaaataccggccagattcgc
gaaatcacggactttgtcctgcagcaactgttggagcagctgggccagctgcttcgtgcc
aacccccatttgtacatttccgtgaacctggcggcctgcgacgtcatggtgccacgcatc
ggccgcgtggtcgcccggcttctggaccagtacagggtagcggcgaaccagattgccttc
gaagtcaccgaacgcggattgattgatgtggtggtcgcccgggacaacctgcaggccctg
cgtgatgtgggccaccaggtgctgatcgatgatttcggtaccggttattgcagcctggcg
tacctgcagacattgccagtggactgcctgaagatcgacaaggccttcatcgacgcgttg
ggccatgacgccgccagcagcggcgtggctccccatatcatccgcatggcccatgccctg
caattgcgggtgattgccgagggcatcgagttcgaggcccaggcgttgctgctcagcagc
gaaggggtgaactatggccagggctggttgttcgctcacccgctcaatgcccggcagttc
agtgaattggtgacgcgcgggcggcgccttgtgggccgccgcctcgatgacgaggcctga
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