Pseudomonas silvicola: LZ023_03810
Help
Entry
LZ023_03810 CDS
T10729
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psiv Pseudomonas silvicola
Pathway
psiv03030
DNA replication
psiv03410
Base excision repair
psiv03420
Nucleotide excision repair
psiv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LZ023_03810 (polA)
03410 Base excision repair
LZ023_03810 (polA)
03420 Nucleotide excision repair
LZ023_03810 (polA)
03440 Homologous recombination
LZ023_03810 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psiv03032
]
LZ023_03810 (polA)
03400 DNA repair and recombination proteins [BR:
psiv03400
]
LZ023_03810 (polA)
Enzymes [BR:
psiv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LZ023_03810 (polA)
DNA replication proteins [BR:
psiv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LZ023_03810 (polA)
DNA repair and recombination proteins [BR:
psiv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LZ023_03810 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LZ023_03810 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WAH58715
LinkDB
All DBs
Position
complement(866630..869395)
Genome browser
AA seq
921 aa
AA seq
DB search
MSKAPLVLVDGSSYLYRAFHALPPLTTSRGMPTGAVKGVLNMLKSLRRQYPDSPFAVVFD
AKGGTFRDEMFADYKANRPSMPDDLRVQVEPLHASVRALGYPLLCVDNVEADDVIGTLAR
SSAAADRPVIISTGDKDMAQLVDGHVTLVNTMTGSVMDIEGVKEKFGVGPEHIIDYLALM
GDKVDNIPGVPGVGEKTAVGLLVGIGGGLKELYENLDKVPALPIRGAKNLPAKLEEHKDM
AFLSYQLATIKIDVPLDVEVEALVCGEPDREALIELYTELEFKSWIDEVQRDAKRAGQEV
VPDAAPVAAVETRYETILDQARFDHWLAKLAKAELFAFDTETTGLDAQKAQLVGLSFAVE
PHEAAYLPLTHSYMGAPAQLDRDTVLLALKPLLEDPAKLKVGQNAKYDINILANCAIGGD
PAQGITVRGVKFDTMLESYVLDSTATRHDMDSLSAKYLGHSTITFEQIAGKGAKQLTFDQ
IPLEQAGPYAAEDADVTLRLHQLFQAKLAAAPSLISVVDDIEMPLVPVLAKIERQGALVD
ADLLGVQSVELGNKLAELERQAYEIAGEEFNLGSPKQLGVILYDKLGMPILNKTAKGQAS
TAEAVLAELADQDFPLPKVLMQYRSLSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAATG
RLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLHAF
QNNLDVHRATAAEVFGVELDQVTIDQRRSAKAINFGLIYGMSAFGLAKQIGVDNKQAKEY
IDRYFARYPGVLAYMERTRTQAAEQGYVETLFGRRLYLADINAKNPALRKGAERTAINAP
MQGTAADIIKRAMVAVDSWLSESGIDARVILQVHDELVLEVREDLVEQVSQQIRPHMSGA
AELDVPLLVEVGVGNNWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagctcctctcgtcctggtggacggttcttcctacctgtaccgggcgttccat
gcgctgccgccgctgactacttcgcgggggatgccgaccggcgcggtgaagggcgtgttg
aacatgctcaaaagcctgcgccgccaatacccggatagcccgttcgccgttgttttcgat
gccaagggcggcacgttccgcgacgaaatgttcgctgactacaaggccaaccgccccagc
atgcccgacgacctgcgcgtgcaggtagagccgcttcacgccagcgtgcgtgccctgggt
tacccgctgctgtgcgtggacaacgtcgaggccgacgatgtcatcggcaccttggcccgc
agcagcgccgcggccgaccgcccggtgatcatttccaccggtgacaaggacatggcccaa
ctggtcgatggccacgtgaccctggtgaacaccatgaccggcagcgtcatggacatcgaa
ggtgtgaaggaaaagtttggcgtggggccggagcacatcatcgactacctggcgctgatg
ggcgacaaagtcgataacatccccggtgttcccggtgtgggtgaaaaaaccgccgtgggc
ctgctggtgggtatcggcggcggcctgaaggagttgtacgagaacctcgacaaggtccct
gccctgcctatccgtggggcgaagaacctgcccgccaagctcgaagagcacaaggacatg
gcctttctgtcctaccagttggcaaccatcaagatcgacgtgccattggacgtggaagtc
gaagcgctggtgtgcggcgagccggaccgcgaagcgctgatcgagctgtacactgaactg
gaattcaagagctggatcgacgaagtccagcgtgacgccaagcgcgccggccaggaagtg
gtgcccgacgccgcgccggtggcggcggttgaaacccgctacgaaaccatcctcgaccag
gcacgattcgaccactggctggcgaagctggccaaggccgagctgtttgccttcgatacc
gagaccaccggcctggatgcgcagaaagcgcaattggtgggcctgtcgttcgccgtggag
ccccacgaagccgcctatttgccgctgacccattcctacatgggcgcacccgcgcaactg
gaccgcgataccgtgttgctggccctcaagccgctgctggaagacccggccaagctgaag
gtggggcagaacgccaagtacgacatcaacatcctggccaactgcgccatcggcggcgat
ccggcccagggcatcacggtgcgcggcgtgaagttcgataccatgctcgaatcctatgtg
ctggactccaccgccacccgtcatgacatggacagcctgtcggcaaaatacctgggccac
agcaccattaccttcgaacagatcgcaggcaagggcgccaagcagctcaccttcgaccag
attcccctggagcaggcaggcccttacgcggcggaagacgctgacgtcaccctgcgcctg
caccagttgttccaggccaaactggccgccgcgccaagcctgatcagcgtggtggacgat
atcgaaatgccgctggtgccggtgctggccaagatcgagcgccagggcgcgctggtcgac
gcggacttgctgggcgtgcagagcgtcgaactgggtaacaagctggccgagttggaacgc
caggcgtacgaaatcgccggcgaggagttcaaccttggctcgcccaagcagcttggcgtg
attctctacgacaagctgggcatgccgatactcaacaagactgccaagggccaggcctct
accgccgaagccgtgctggcggagctggccgaccaggacttcccgctgcccaaggtgctg
atgcagtaccgctccctgagcaagctgaaaagtacctacaccgaccgcctgcccgagcag
atcaacccgcgcactggccggatccatacctcctaccaccaggcggtggcagccaccggg
cgcctgtcgtccagcgacccgaacctgcagaacatcccgattcgcaccgctgaaggccgc
cgcattcgccaggcgttcgtcgcgcccaagggctacaaactgctggccgcggactattcg
cagatcgaactgcgcatcatggcccacctggccaaggatgaagggctgctgcatgctttc
cagaacaacctcgacgtgcaccgtgccacggctgccgaggtatttggcgtggagcttgat
caggtcaccatcgaccagcgccgcagcgccaaggcgatcaacttcggcctgatctatggc
atgagcgctttcggcctggccaagcagattggtgtcgacaacaagcaggccaaggaatac
atcgaccgctacttcgctcgctaccccggtgtgcttgcctacatggagcgcacccgcacc
caggccgccgaacagggctatgtggaaacgctgttcggtcgtcgcctgtacctggccgac
atcaacgccaagaacccggccttgcgcaaaggcgccgagcgcaccgcgatcaacgcgccc
atgcagggtaccgctgccgatatcatcaagcgcgccatggtggcagtggacagctggctg
agcgaatcgggcatcgatgcccgcgtcattctgcaggtacacgatgaactggtcctggaa
gtgcgtgaggatctggtggaacaggtcagccagcagatccgcccgcacatgagcggcgca
gctgaacttgacgtgccgctgctggtggaagtgggggtaggcaacaactgggacgaggcg
cactga
DBGET
integrated database retrieval system
