Pseudomonas silvicola: LZ023_05160
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Entry
LZ023_05160 CDS
T10729
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psiv Pseudomonas silvicola
Pathway
psiv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psiv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LZ023_05160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psiv03021
]
LZ023_05160
Transcription machinery [BR:
psiv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LZ023_05160
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
PhyR_sigma-like
HTH_23
Sigma70_r4
HTH_24
HTH_29
GerE
HTH_Tnp_ISL3
HTH_7
HTH_11
PapC_N
Motif
Other DBs
NCBI-ProteinID:
WAH58964
LinkDB
All DBs
Position
complement(1132636..1133136)
Genome browser
AA seq
166 aa
AA seq
DB search
MSSQEFAVGSLYRAHHGWLNTWLRSHLGNAADAADLAQDTFLRLLQRTERLELSAPRAFL
RTIARGLVIDHWRREELHRAYLETIALLPAAEAPSLETRALLLELLEHIARLLDGLKPKV
RKAFLLSQCEGMPHKDIAAQLGVSLRSVERYVADALFHCYLLRYEQ
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcacaagaattcgccgtgggttcgctctaccgcgcccatcacggctggctcaac
acctggctgcgcagccacctgggcaacgcggccgatgccgcggacctggcccaggacacc
ttcctgcgcctgctgcaacgcactgaacgccttgaactgagcgccccccgtgcgttcctg
cgcactatcgcccggggcttggtgatcgaccattggcgccgcgaagaactgcaccgcgcc
tacctggaaaccatcgccctactgcccgccgccgaagctccgagcctggaaacccgcgcc
ttgctactggagttgctggaacatatcgcgcgcctgctggacgggctcaagcccaaggtg
cgcaaagccttcctgctatcccagtgcgaaggcatgccccacaaggatatcgccgcgcaa
ttgggcgtgtccctgcgctcggtggagcgctatgtggccgatgccctgttccattgctac
ctgctgcgctatgaacagtga
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integrated database retrieval system
